Gene Lcho_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1238 
Symbol 
ID6160742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1326564 
End bp1327196 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content75% 
IMG OID641663992 
Productputative fructose transport system kinase 
Protein accessionYP_001790272 
Protein GI171057923 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1072] Panthothenate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.45072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGC CCCTGCCCGA CGACCTGCGC CACGCCCTCG CCACCCTGCT CGCCGACGGC 
CAGCGCCGCC TGATCGGCCT GGTCGGGCCG CCGGGCGCGG GCAAGTCGAC GCTGTCGGCG 
GCGATCCTGG CCGCCCTGCC CGGCCAGGCC CAGGTGGTGC CCATGGACGG CTACCACCTC 
GCACAACGTG AGCTCGAGCG CCTCGGCCGC GCCCACCGCA AGGGCGCGCC CGACACCTTC 
GATTCGGCCG GCTACGTGGC GCTGCTGCGG CGCCTGCGTG AGCAGCGCGC CGACGAGACG 
GTCTACGCGC CCGAGTTCCG GCGCGAGATC GAGGAGCCGA TCGCGAACGC GATTCCCGTG 
TTCGCCGACA CGCCGCTGAT CGTCACCGAA GGCAACTACC TGCTGCTCGA CGACGGCCCG 
TGGGCGCAGG TGCGCGGCCT GCTCGACGAG GTCTGGTACA TCGACACCGA CGAGGCCGCC 
CGCGGCGCCT GGCTGCTGGC GCGCCACATG CACCACGGCC GCAGCGCCGA GGCGGCTGCG 
GCCTGGATCG CCGGCACCGA CGAGCCCAAC GCGCGGCTGA TCGCTGCCGG CAAGGCGCGC 
GCCGACCGCC AGGTGCGCTG GCCGCCGGCC TGA
 
Protein sequence
MNPPLPDDLR HALATLLADG QRRLIGLVGP PGAGKSTLSA AILAALPGQA QVVPMDGYHL 
AQRELERLGR AHRKGAPDTF DSAGYVALLR RLREQRADET VYAPEFRREI EEPIANAIPV 
FADTPLIVTE GNYLLLDDGP WAQVRGLLDE VWYIDTDEAA RGAWLLARHM HHGRSAEAAA 
AWIAGTDEPN ARLIAAGKAR ADRQVRWPPA