| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1219 |
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| Symbol | |
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| ID | 6163852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1305199 |
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| End bp | 1305957 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663973 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001790253 |
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| Protein GI | 171057904 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCG AAACCGATCC GACCCGCTTC ATCCTGCTGC ACACCAGCCA TGCCGGCAAC
GTCGGTGCCA CTGCCCGGGC GATGAAGGTG ATGGGTTTTC GCGACCTGGT GCTGGTCGCG
CCCCGTTTTG CCGACGTGCT CAGCCGCGAG GAGACCGTGG CGATGGCCAG CGGCGCGGCC
GACATCCTGG TGCGCGCACG CATCGTCGCC ACGCTGGACG AGGCGCTCGA GGGCATCCAC
GTGGCCTGCG CCACCGCGAT GACGCCGCGC GATTTCGGCC CGCCCACCTC GACGCCGCGC
GAGCATCTGC CGGCGTTGGC GGCCGGTGGC GAGCGGGTCG CGTTCGTGTT CGGCAGCGAG
CGCTACGGCA TGTCCAACGA GGAGGTCTAC CGCTGCCAGA TCTGCCTGTC GATCCCGACC
CAGCCCGACT ACGGCTCGCT CAACCTCGCG CAGGCGGTGC AGCTGATGGC CTACGAATGG
CGCATGGCGC TGGGCGGCTA CGACGTCAGC GCGCGCACGC CGGCGGTGCA GCGCGCCAGC
CTCGACGAGG TGCAGGGCGC GCTGTCGCAC TGGCAGGACA CGCTGGTGGC GCTCGGTTTC
CTCGATCCGG CAGCGCCGAA GAAACTCATG CCGCGCCTGC AGCAACTGCT CAACCGCGCG
GCCCTGACAC GCGAGGAGGT GCACATCCTG CGGGGCATTG CCCGTCTGGC TGCACGGGCT
GCGGCCGCCG GCGATGTGCC GACGACACGC AAACCATGA
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| Protein sequence | MTPETDPTRF ILLHTSHAGN VGATARAMKV MGFRDLVLVA PRFADVLSRE ETVAMASGAA
DILVRARIVA TLDEALEGIH VACATAMTPR DFGPPTSTPR EHLPALAAGG ERVAFVFGSE
RYGMSNEEVY RCQICLSIPT QPDYGSLNLA QAVQLMAYEW RMALGGYDVS ARTPAVQRAS
LDEVQGALSH WQDTLVALGF LDPAAPKKLM PRLQQLLNRA ALTREEVHIL RGIARLAARA
AAAGDVPTTR KP
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