| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1216 |
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| Symbol | |
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| ID | 6163849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1302113 |
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| End bp | 1302925 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663970 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001790250 |
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| Protein GI | 171057901 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA TCTATTCGCT CGCCCAGTTG ATGGCGCTGC CGTATTCGCC CGCCGAGATG
ATCCGTCTGG CCGCCGAGAC CGGCTGCGCC GGCGCCGGCA TCCGCATGCT GCCCACCGCG
CCCGGCGGCC AGGCTTACCC GCTGATGGAC GACGCGGTGA TGCTGCGCGA GACGCTGGCG
GCGATCGCCG ACACCGGCGT CAAGGTGTTC GACCTCGAGG TGGTGCGCAT CGGCGCGGCC
TTCGACGTGC GCGATTTCCA GCGTTTCATC GAGATCGGCG CGCAGATCGG CGCGGCCCAC
ATCCTGGTTG CCGGTGACGA CCCCGACGAG GCGCGCCTGA CGGCGTCCTA CGCCGCCTTG
TGCGACGCCG CGGCACCGTT CGGCCTGAGC GCCGACCTCG AATTCATGCC GTGGACCGCG
GTGCCGAACC TGCGCAGCGC CAAGCGCATC GTCGGCGCGG CGGCGCGCCC CAACGGCGGC
GTGCTGGTCG ATGCGCTGCA TTTCGCGCGC TCCGGCAGCC GGCTCGACGA GCTCGACGAC
ATCCCGCGCG CCTGGCTGCA TTACGCCCAG ATCTGCGACG GCGCGGTGCC CGGCCCTGAC
ACCGTCGAGG GCCTGATCCA CGACGCCCGC TGCGAGCGGC TGTTGCCGGG CGAGGGCGGC
ATCGACCTGC GCGCGCTGTT CGCGCGGCTG CCGGCCGATC TGCCGGTCAG CATCGAGGTG
CCGAGCGACA GCCGCGCGCC GCAGGTCGGT TATCCGGCCT GGGCTGCGCG TGCCAAGGCC
GACACGCTGG CGGTGCTGGG AGAACGGGCA TGA
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| Protein sequence | MSRIYSLAQL MALPYSPAEM IRLAAETGCA GAGIRMLPTA PGGQAYPLMD DAVMLRETLA
AIADTGVKVF DLEVVRIGAA FDVRDFQRFI EIGAQIGAAH ILVAGDDPDE ARLTASYAAL
CDAAAPFGLS ADLEFMPWTA VPNLRSAKRI VGAAARPNGG VLVDALHFAR SGSRLDELDD
IPRAWLHYAQ ICDGAVPGPD TVEGLIHDAR CERLLPGEGG IDLRALFARL PADLPVSIEV
PSDSRAPQVG YPAWAARAKA DTLAVLGERA
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