Gene Lcho_1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1211 
Symbol 
ID6160807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1296419 
End bp1296955 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content62% 
IMG OID641663965 
Productcytochrome B561 
Protein accessionYP_001790245 
Protein GI171057896 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCTA CCCATCGGCC TGAACCCGTC CGGGTCTGGG ATCTCTTCGT GCGCGTTTTC 
CACTGGTCCC TGGTGACGTG CATCCTTCTC AACTACTTTG TCGTCGACGA TGGTGAAGAC
CTCCATCAGT GGCTGGGCTA TGCCGCCGCT GCCTTGGTGG TGTCACGCAT CGTCTGGGGT
TTTGTCGGCA CGCGGTATGC GCGGTTCAGC GACTTCTTTC CGACCTACCG CCGCATCCGT
GATCACCTGA GCCGCTTGCG CTGCGGACAG GCCGACGGCC ATGTCGGCCA CAACCCGCTG
GGTGCGTTGA TGATGCTGGC GCTGATGGCG CTGGTGCTGT CGTTGGGACT CACCGGTTTT
CTGCAGACCA CGGATGCTTT CTGGGGAGAT GAGCTGATGC AGGAAACCCA TGAATGGCTG
GGTTCCGCAC TCATCGCGTC GGCCGGCCTG CACGCCGTGG CGGCCATCGT CATGGGACGT
CTGGAGCGCG TGAATCTCGT GCGTGCGATG GTCACCGGCG TGAAGGTGAT GCGCTGA
 
Protein sequence
MTSTHRPEPV RVWDLFVRVF HWSLVTCILL NYFVVDDGED LHQWLGYAAA ALVVSRIVWG 
FVGTRYARFS DFFPTYRRIR DHLSRLRCGQ ADGHVGHNPL GALMMLALMA LVLSLGLTGF
LQTTDAFWGD ELMQETHEWL GSALIASAGL HAVAAIVMGR LERVNLVRAM VTGVKVMR