Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1211 |
Symbol | |
ID | 6160807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1296419 |
End bp | 1296955 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641663965 |
Product | cytochrome B561 |
Protein accession | YP_001790245 |
Protein GI | 171057896 |
COG category | [C] Energy production and conversion |
COG ID | [COG3658] Cytochrome b |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCTA CCCATCGGCC TGAACCCGTC CGGGTCTGGG ATCTCTTCGT GCGCGTTTTC CACTGGTCCC TGGTGACGTG CATCCTTCTC AACTACTTTG TCGTCGACGA TGGTGAAGAC CTCCATCAGT GGCTGGGCTA TGCCGCCGCT GCCTTGGTGG TGTCACGCAT CGTCTGGGGT TTTGTCGGCA CGCGGTATGC GCGGTTCAGC GACTTCTTTC CGACCTACCG CCGCATCCGT GATCACCTGA GCCGCTTGCG CTGCGGACAG GCCGACGGCC ATGTCGGCCA CAACCCGCTG GGTGCGTTGA TGATGCTGGC GCTGATGGCG CTGGTGCTGT CGTTGGGACT CACCGGTTTT CTGCAGACCA CGGATGCTTT CTGGGGAGAT GAGCTGATGC AGGAAACCCA TGAATGGCTG GGTTCCGCAC TCATCGCGTC GGCCGGCCTG CACGCCGTGG CGGCCATCGT CATGGGACGT CTGGAGCGCG TGAATCTCGT GCGTGCGATG GTCACCGGCG TGAAGGTGAT GCGCTGA
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Protein sequence | MTSTHRPEPV RVWDLFVRVF HWSLVTCILL NYFVVDDGED LHQWLGYAAA ALVVSRIVWG FVGTRYARFS DFFPTYRRIR DHLSRLRCGQ ADGHVGHNPL GALMMLALMA LVLSLGLTGF LQTTDAFWGD ELMQETHEWL GSALIASAGL HAVAAIVMGR LERVNLVRAM VTGVKVMR
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