Gene Lcho_1209 details

Gene Information

• Locus tag: Lcho_1209
• ID: 6160805
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 1295384
• End bp: 1295971
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 641663963
• Product: hemerythrin HHE cation binding domain-containing protein
• Protein accession: YP_001790243
• Protein GI: 171057894
• COG category: [S] Function unknown
• COG ID: [COG3945] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 76
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGACGC CCTCCGCACT GACCATCATC CGCGCCGAAC ACCAGGCCCT CGCGGCGATC 
CTGCACGCGC TGCGCCACAC ACTGTGCGAC ATCCGCGATC ACGGCGCGAA GCCGAACTTC 
GAGGTGCTGC GCAGCCTGCT GTTCTACGTC GACGCCTACC CCGAGCGGCT GCATCACCCC 
AAGGAAACCG ATCACCTGTT CAAGCGCCTG CGCGAGCGCA GCAGCCAGGC CGCCGAGGTG 
CTCGACCGGC TCGACCTCGA CCACGCCAGC GGCGAGCAGG CGATCCTGCG GCTCGAACAT 
CAGCTGCTCG AATACGAGAT GCTCGGCGAG ACCCGGCTGG CCGAGTTTGC CGCTGCGGTC 
GAGCTGTTCT GCGACCGCTA CATGGCGCAC ATGCATCTGG AGGAACTGGA GATCCTGCCG 
CTGGCCCGGC ATGTCCTGAC CGAAGAGGAC TGGCTTTCGA TCAACGCCGC CTTCGAGTCC 
AACCGCGACC CGCTGACCGG CCACAAGCCG GAGAAGGAAT TCGAGGCGCT GTTCAGCCGC 
ATCGTCAACC TGCTGCCGGC GCCGCTGGGG TTGGGTTCTG CAGCTTGA 

 

Protein sequence

MTTPSALTII RAEHQALAAI LHALRHTLCD IRDHGAKPNF EVLRSLLFYV DAYPERLHHP 
KETDHLFKRL RERSSQAAEV LDRLDLDHAS GEQAILRLEH QLLEYEMLGE TRLAEFAAAV 
ELFCDRYMAH MHLEELEILP LARHVLTEED WLSINAAFES NRDPLTGHKP EKEFEALFSR 
IVNLLPAPLG LGSAA