| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1204 |
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| Symbol | |
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| ID | 6161154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1290784 |
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| End bp | 1291632 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663958 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001790238 |
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| Protein GI | 171057889 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATCC ACATCTTCAA CGGCCTGGTC TACGGCGCAT TGCTGATCGT GATGTGTTCG
GGGCTGGCGC TGATCTACGG CCTGCGCCGG GTCGTCAACT TCGCGCACGG CTCGCTCTAC
ATGCTGGGCG CCTACATCGG CTTCTCGATT GCGCAGGCGA GCAACTTCTG GGTCGCGCTG
GTCGCGGCCC CCGCGGTGAT GGCGCTGTTG GGCGTGCTGC TGGATCGCTG GGGTTTCCGC
CTGCTGCAGC ACCGCGATCC GCTGTCGGTG GTGCTGGTCA CCTTCGGCCT GCTGCTGGTG
ATCGAGGACT TCGTGCAGAC CGTCTGGGGC AAGAGCAACC TGTCGGTGGT GACACCGTCG
GCGCTGGCGT TCTCCGTCGA CGTGTTCGGC ACCGCGCTGC CGGCCTATCG CATCGCGGTG
ATCGGCGTCG GCGCGGCCGT GGCGATCGGC CTGACGCTGT GGCTGCGCTT CTCGCGTGCC
GGCCTGTTCG TGCGCGCCGC CAGCACCGAC CCGGTGACGA CCGCGATGCA GGGCGTCAAC
ACCGACGCGC TGAGCGCCTT CGTGGTCGGC CTCGGCACCG CGCTAGCCGG CCTGGCCGGG
GTGGTGGCGG CGCCGTTCCT GTCGCTGTCG CCGTCGATGA GCAGCGACGT GATCATCGAT
TCCTTCGTGG TCGTGGTGGT CGGTGGCCTC GGCAGCCTGG CCGGCGCGTT CGTGGCGGCG
ATGGTGCTCG GCATGGTGCA GTCGCTCGGC GCCGTCTGGC TACCCGACAC CTCGGTGCTG
CTGCCCTTCC TGCTGATGGT GGCGATCCTG ATCTGGAAGC CGGCCGGCTT TGCCGGCAGC
CGCACCTGA
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| Protein sequence | MFIHIFNGLV YGALLIVMCS GLALIYGLRR VVNFAHGSLY MLGAYIGFSI AQASNFWVAL
VAAPAVMALL GVLLDRWGFR LLQHRDPLSV VLVTFGLLLV IEDFVQTVWG KSNLSVVTPS
ALAFSVDVFG TALPAYRIAV IGVGAAVAIG LTLWLRFSRA GLFVRAASTD PVTTAMQGVN
TDALSAFVVG LGTALAGLAG VVAAPFLSLS PSMSSDVIID SFVVVVVGGL GSLAGAFVAA
MVLGMVQSLG AVWLPDTSVL LPFLLMVAIL IWKPAGFAGS RT
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