| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1143 |
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| Symbol | |
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| ID | 6163816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1224614 |
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| End bp | 1225531 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641663897 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001790177 |
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| Protein GI | 171057828 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCC ATGCCCTCCT CTTGCTGCCG GATTTCCTGC TGATCGTCGT CGGCTTCCTG
GTCTGCCGCT ACACCGCCCT GGACCGCAGC GTGTGGTCGG GCACCGAGCG CATGGTGTAC
TGGCTGCTGT TTCCGGTGCT GCTGTTCACG TCCATCGTCA AGAGCCCGCT GGCACCGATG
GCCACGCTCA GCCTGGGCGC CGGCGGCATG CTGGTGGTGG CCACCGGTTT CGTGCTGGCG
ACGCTGCTGC GCCGGCTGCC GGGCATCGAT GCGCACCTGC AGGCCTCGGG CGCGCAGGTG
GCGTTCCGCT TCAATTCCTA CGTCGCGCTG GCGCTGGCCG AGCGGCTGGG CGGCGCGCCG
GCGGTGGCCT GGATCGCCTT GCTGATCGCG CTGTGCGTGC CGCTGTGCAA CCTGGGTGCG
GTCTGGTCGC TGTCGCGCCA CGGCGGCCAG AACACGCTGC GCGAGCTGCT GCACAACCCG
CTGATCCTCG CCACCGTGGC CGGGCTGATC GCCAACCTGG CGGGGCTGCG GCTGCCGCCC
ACGGTCGACA TCACGCTCAG CCGCATCGGC GCGGCCGCCC TGCCGCTGGG CCTGATGGCG
GTGGGCGCGG GCCTGCAGTT CGGCGGCCTG CAGAAGGCGC CGGGCCTGGC CGCCGGGCTG
CTGGCGATTC GCCACGCGGT GCTGCCGGCG GTCGCGCTCG GCTTGGGCCT GCTGCTGGCG
CTGCCCGATG GCCAGGCGCA GGTGCTGGTC GCGTTCGCGG CGCTGCCCAC CGCGTCGAGC
TGCTACGTGC TGGCCGCGCG CATGGGCGGC GACGGGCCCT ACGTGGCCGG CCTGGTGACG
GCATCGACGC TGCTGGGCAT GCTCAGCGTG CCGCTGGCGA TGCTGGCGTT TGCCGCCACC
CGCGGGCTCG GCGGCTGA
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| Protein sequence | MLSHALLLLP DFLLIVVGFL VCRYTALDRS VWSGTERMVY WLLFPVLLFT SIVKSPLAPM
ATLSLGAGGM LVVATGFVLA TLLRRLPGID AHLQASGAQV AFRFNSYVAL ALAERLGGAP
AVAWIALLIA LCVPLCNLGA VWSLSRHGGQ NTLRELLHNP LILATVAGLI ANLAGLRLPP
TVDITLSRIG AAALPLGLMA VGAGLQFGGL QKAPGLAAGL LAIRHAVLPA VALGLGLLLA
LPDGQAQVLV AFAALPTASS CYVLAARMGG DGPYVAGLVT ASTLLGMLSV PLAMLAFAAT
RGLGG
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