| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1140 |
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| Symbol | |
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| ID | 6163813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1220088 |
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| End bp | 1221452 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663894 |
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| Product | hydroxydechloroatrazine ethylaminohydrolase |
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| Protein accession | YP_001790174 |
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| Protein GI | 171057825 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC TGTTGATCCA CAACGCGCGC CTGCTGGTGA CGATGGACGC CCAGCGGCGC
GAGATCGCCG ACGGCGCCGT CTTCGCCCGC GACGGCGTGA TCGAGGCGGT CGGCGCCAGC
GCCGAACTGC CGCAGACCGC CGACGAGGTG ATCGACGCAC GCGATCAGGT CGTCATCCCC
GGCCTGGTGA ACACGCACCA CCACATGTAC CAGACGCTCA CGCGCGTGAT CCGCCCAGCG
CAGGATTGCG AGCTGTTCGG CTGGCTGCAG ACGCTCTACC CGATCTGGTC GCACCTGACG
CCCGAAATGG TGCACGTGTC GACCCAGACC GCGATGGCCG AGCTGCTGCT GTCGGGCTGC
ACCACCAGCA GCGACCACCT CTACATCTTC CCCAACAGCG TGCGGCTCGA CGACAGCATC
GAAGCCGCCG CGCAAATCGG CATGCGTTTC CACGCCGCAC GCGGCTCGAT GAGCGTGGGC
CAGTCGCAAG GCGGCCTGCC GCCCGACGGC GTGGTCGAGA GCGAGCCCGC CATCCTGCGC
GAGACCCAGC GCCTGATCGA GCGCTGGCAC GACCCGGCGC GCCACGCGAT GCAGCGCATC
GTGGTGGCGC CGTGCTCGCC GTTTTCGGTC AGCCGCGAGC TGATGCGCGA TGCGGCGGTG
CTGGCGCGCG AACACGGTGT CTCGCTGCAC ACCCACCTGG CCGAAAACGA CAACGACATC
GCCTACACGC GTGAGAAGTT CAACTGCACG CCGGCCGAAT ATGCCGAGCA GCTCGGCTGG
GTCGGCCGCG ACGTCTGGCA CGCCCACTGC GTCAAGCTCG ACGAAGCCGG CATCGCCCTG
TTTGCGCGCA CCGGCACGGG GGTGTCGCAC TGCCCGGGAT CCAACATGCG ACTCGCCTCG
GGCATCGCGC CGATCCGTGC CATGCGCGAT GCGGGCGTGC CGGTGTCGAT CGCGGTCGAC
GGCTCGGCCA GCAACGACAG CGGCCACATG CTCGGCGAGG CGCGGCTCGC GCTGCTGCTG
CAACGCGTGG CGCACGGCCC GGTCAAGGGA CCGAGTGCAT TGACCGCGCG CGAGGTGCTC
GAGATCGCCA CGCGGGGCGG CGCCGCGGTG CTCAACCGCG ACGACATCGG CGCGCTCGCG
CCGGGCATGA GCGCCGACAT CGTGACGATC CCGCTCGACG ACATCGGCCT GGCCGGTGCG
CACCACGACC CACTGGCCGC GCTGTTCTTC TGCCACGTGC CGCGCGTGAA GCACAGCATC
GTCAACGGCC GCGTGGTGGT GCGCGACGGG CGCATCACGA CGCTGGAACT GCCGGTGCTG
ATCGAGCGGC ACAACCGGCT GGCGGCGGAG CTGGTCAACG CCTGA
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| Protein sequence | MTTLLIHNAR LLVTMDAQRR EIADGAVFAR DGVIEAVGAS AELPQTADEV IDARDQVVIP
GLVNTHHHMY QTLTRVIRPA QDCELFGWLQ TLYPIWSHLT PEMVHVSTQT AMAELLLSGC
TTSSDHLYIF PNSVRLDDSI EAAAQIGMRF HAARGSMSVG QSQGGLPPDG VVESEPAILR
ETQRLIERWH DPARHAMQRI VVAPCSPFSV SRELMRDAAV LAREHGVSLH THLAENDNDI
AYTREKFNCT PAEYAEQLGW VGRDVWHAHC VKLDEAGIAL FARTGTGVSH CPGSNMRLAS
GIAPIRAMRD AGVPVSIAVD GSASNDSGHM LGEARLALLL QRVAHGPVKG PSALTAREVL
EIATRGGAAV LNRDDIGALA PGMSADIVTI PLDDIGLAGA HHDPLAALFF CHVPRVKHSI
VNGRVVVRDG RITTLELPVL IERHNRLAAE LVNA
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