| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1123 |
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| Symbol | |
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| ID | 6162145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1199345 |
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| End bp | 1200244 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663877 |
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| Product | 2-hydroxy-3-oxopropionate reductase |
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| Protein accession | YP_001790157 |
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| Protein GI | 171057808 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.356226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG GATTCATCGG CCTCGGCATC ATGGGCGCGC CCATGGCGGG CCATCTGCTG
GCCGCCGGCC ATGAACTGTT CGTGCACACC CGCAGCGCGG TGCCGGCGGC GCTGGGCGCG
GCCGGTGCGG TGGCCTGCGC CAGCGGCGCC GAAGTGGCGC AGCGCGCCGA CGTGGTCTTC
ACGATGGTGC CCGACACCCC CGACGTGCAG AAGGTGCTGT TCGGCGAAAA CGGCGTGGCC
TCCGGTCTGA GCGCTGGGAA AACCGTCGTC GACATGAGCA GCATCTCGCC GATCGAGACC
CAGGTCTTCG CCAGGCAGAT CGCCGCGCTC GGCTGCGATT ACGTCGACGC GCCGGTCAGC
GGCGGCGAGG TCGGCGCCAA GGCCGCCAGC CTGACGATCA TGGTGGGCGG CAGCGAGGCG
GCGTTCGCGC GCATCCAGCC GCTGCTGGCG CTGATGGGCA AGAACATCAC GCACGTGGGC
GACGTCGGCG CGGGCCAGAT CACCAAGGTG GCCAACCAGA TCATCGTCGC GCTCAACATC
GCCGCGGTCG GCGAGGCGCT GGTGTTCGCC AGCAAGGCCG GCGCCGATCC GGCCAAGGTG
CGGCAGGCGC TGATGGGCGG ATTCGCGTCC AGCCGCATCC TCGAGGTGCA TGGCGAACGC
ATGATCAAGC GCACCTTCAA CCCGGGTTTT CGCATCGGCC TGCACCAGAA GGACCTGAAT
CTGGCGCTGC AGGGCGCCAA GGCGCTGGGC GTGGCGCTGC CCAGCACCGC CAACGCGGCG
CAGCTGATGC AGGTGTGCGC CGCGCAGGGC TGGGATCAGC TCGACCACTC GGCGCTGGTC
AAGGCGCTGG AACTGATGGC CGCGCACGAC GTGGCCGCGG CGCCCGACGC GGCTGCCTGA
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| Protein sequence | MKLGFIGLGI MGAPMAGHLL AAGHELFVHT RSAVPAALGA AGAVACASGA EVAQRADVVF
TMVPDTPDVQ KVLFGENGVA SGLSAGKTVV DMSSISPIET QVFARQIAAL GCDYVDAPVS
GGEVGAKAAS LTIMVGGSEA AFARIQPLLA LMGKNITHVG DVGAGQITKV ANQIIVALNI
AAVGEALVFA SKAGADPAKV RQALMGGFAS SRILEVHGER MIKRTFNPGF RIGLHQKDLN
LALQGAKALG VALPSTANAA QLMQVCAAQG WDQLDHSALV KALELMAAHD VAAAPDAAA
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