Gene Lcho_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1075 
Symbol 
ID6162345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1145034 
End bp1145513 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content67% 
IMG OID641663829 
Productrhodanese domain-containing protein 
Protein accessionYP_001790109 
Protein GI171057760 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTGC CCGACGCCGC CGCCGTGCAG CAGGAACAGC TTGAAATCAC CCTCGCCACC 
GCCACCGAGC TGTGCGAGTT GGGCCTGGGT TGCATGGTCG ACATCCGCCA GGGTTTCGAG 
ATCGAGCTCA AGGGCGCGAT CCCCGGCACC ACCCACATCC CGCTGTGCGA GGTCAAGCTG 
CTGCTCGGCC ACGCGCTCAA CGAGGACGAG CAGGACACGC TCGACGCCGG CACGCCCAGC 
GCGATCGACG TGCAGGCCTT CATCCGCATG GTCAACCAGA TCCACCATGT GCGCGATTGC 
ATCCTGCTGT GCGTGTGCAA CAGCGGCCGG CGCAGCCTGG TGGCCGCGCG CATGCTGAGG 
TCGCTCGGCT ACGCGCGGGC GTATTCGGTG CAGGGCGGCT TCCAGGCCTG GAAGGCCGTC 
AAAGCCCAGG CCGAAGCCCA GGCCCAAGGC GACGCGCAGC CGGATCAGAA CAGGAAATAA
 
Protein sequence
MNLPDAAAVQ QEQLEITLAT ATELCELGLG CMVDIRQGFE IELKGAIPGT THIPLCEVKL 
LLGHALNEDE QDTLDAGTPS AIDVQAFIRM VNQIHHVRDC ILLCVCNSGR RSLVAARMLR 
SLGYARAYSV QGGFQAWKAV KAQAEAQAQG DAQPDQNRK