| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1014 |
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| Symbol | |
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| ID | 6160139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1083668 |
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| End bp | 1084423 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663764 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_001790050 |
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| Protein GI | 171057701 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5581] Predicted glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACCC AACCGATGCC TCTGTCGCTC ACCGACGCCA AGCCGGGCCA AGGTGAATAC
CGTGTGCGCG CCGGCAGCGA GATCCGCGCC CTGTTGCGCC GCTTCGCCGA CGAGGAGCTG
CCGATCACCC TGGCCACGCC CGATGGCGTG AGCTACACCA CCTGTCTGTG GGCCGACGAC
CCCGAGCGTG CCGTGCTGGT GCTGTCGGCC GACGCCGCCG ACGCGCGCGT GCAGCGCCTG
ATCGAGGCCG AGGAGGCGGT GGCGGTGGGT TATCTCGACA GCGTCAAGAT CCAGTTCGAC
CTGAACGGCC TGATGCTGGT GCACGGCCGT GACGCGAGTG CCCTGCACGC CCAGTTCCCG
CGCGAGATCT ACCGCTTCCA GCGCCGCGAC GGCTTTCGCG TGCGGCCGGT GGGCCATGCC
TGCCCCGAGC TGCAGCTGCG CGTGTCCGGG CCGACCGACA CCGAACTGAC GCTGCGCGTG
CTCGACCTGA GCCACGGCGG GCTGGCGCTG TTCCTGCCCG ACGATCAGCC TGCGCTGCCG
GTGGGCACCA GCGTGCGCGC GGCCCGCCTG GCGCTCGACC CGCTGACGCA GGTGCAGGTC
GCGCTGCGGG TGGTGCACGT GGCGCCGCTC AAGGAGTCGG CACACGGCAG CCGGCTGGGC
TGCGAGATCG AGGGCCTGTC GGGCGTGGCC TCGCGCACCT TGCAGCGCTA CATCGACCAG
ACCCAGAAAC GCCGTCGCCT CCTGGCGGTG TCCTGA
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| Protein sequence | MSTQPMPLSL TDAKPGQGEY RVRAGSEIRA LLRRFADEEL PITLATPDGV SYTTCLWADD
PERAVLVLSA DAADARVQRL IEAEEAVAVG YLDSVKIQFD LNGLMLVHGR DASALHAQFP
REIYRFQRRD GFRVRPVGHA CPELQLRVSG PTDTELTLRV LDLSHGGLAL FLPDDQPALP
VGTSVRAARL ALDPLTQVQV ALRVVHVAPL KESAHGSRLG CEIEGLSGVA SRTLQRYIDQ
TQKRRRLLAV S
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