Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0994 |
Symbol | |
ID | 6162442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1063583 |
End bp | 1064404 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641663744 |
Product | enoyl-CoA hydratase |
Protein accession | YP_001790030 |
Protein GI | 171057681 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAGC CCTCCAACGC CCCGTTCGCC CCCGTCACCG GCCTGCTGGC CGCGCTCGAT CTGCTGCAGA TCAGCTGCAA CGGCAAGGTG CTGCACATCT GCATCAACCG CCCGGCCAAG CGCAACGCGC TGTCGGACAC GCTGATCCAG CAACTGCACA CCGCCTTCGT CAACCTGCCC GACGGCGTGG CCGCGGCGGT GATCAGCGGC GCGGGCGAGC ACTTCTGCGC CGGCCTCGAC CTGTCGGAGC TGGTCGAGCG CGACATCGGC TCGGGCGTCA AGCATTCGCG CATGTGGCAC GCCGCCTTCG ACCTGATCCA GTTCGGCCAA GTGCCGGTGG TGGCCGCGCT GCACGGCGCG GTGGTCGGCG GCGGGCTGGA GCTGGCGTCG GCCTGCCACG TGCGGGTGGC CGACGAAAGC ACCTACTTCG CGCTGCCCGA AGGCCAGCGC GGCATCTTCG TGGGCGGCGG CGGCTCGGTG CGCATCCCGC GCCTGATGGG CGTGGCGCGC ATGACCGACC TGATGCTGAC CGGCCGCGTC TACGACGCCG CCGAGGGCGT GGCCGCGGGC CTGGCGCAGT ACCTGGTGCC GCAAGGCACC TCGGTCGACC GCGCCATCGC GCTGGCCCAG CGCATCGCCA CCAACGCGCC GCTGTCGAAC TACGCCGTGA TGCACGCGCT GCCGCGCATC GCCGACCAGT CGATGAGCGA CGGCCTGTTC ACCGAATCGC TGATGGCCGC GGTGGCCGAA AGCACCCCCG ACGCGCAGGA CCGCCTGCGC GCCTTCCTCG AAAAACGCGC CGGCAAGGTG GTGAAGTCAT GA
|
Protein sequence | MTQPSNAPFA PVTGLLAALD LLQISCNGKV LHICINRPAK RNALSDTLIQ QLHTAFVNLP DGVAAAVISG AGEHFCAGLD LSELVERDIG SGVKHSRMWH AAFDLIQFGQ VPVVAALHGA VVGGGLELAS ACHVRVADES TYFALPEGQR GIFVGGGGSV RIPRLMGVAR MTDLMLTGRV YDAAEGVAAG LAQYLVPQGT SVDRAIALAQ RIATNAPLSN YAVMHALPRI ADQSMSDGLF TESLMAAVAE STPDAQDRLR AFLEKRAGKV VKS
|
| |