Gene Lcho_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0977 
Symbol 
ID6163267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1043041 
End bp1043370 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content65% 
IMG OID641663728 
Producthypothetical protein 
Protein accessionYP_001790014 
Protein GI171057665 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC TCGTGCTGTC GTTTTTCCTG GCCTTGTGCG CCGCGGCGAC TTTTGCCGCC 
GCCGATGTCA ACAAGGCCAA TCAGGCCGAA CTCGAGGCGG TCAAGGGCAT CGGGCCGGCG
ATGTCGGGCA AGATCCTCGA CGAGCGCAAG AAGTCGGATT TCAAGAGCTG GGACGACTTC
ATCGGCCGCG TCAAGGGTGT CGGGCCGGGC AATGCGGCCC GGTTTTCGGA AGCCGGCCTG
ACCGTCAACG GATCGGCATT CGCCGCGGCA GCCACGGCGG CCAAGCCGGG TGTCGTGGCC
AAGGCCGACA AGGCCGTCAA GGACAAGTAG
 
Protein sequence
MFKLVLSFFL ALCAAATFAA ADVNKANQAE LEAVKGIGPA MSGKILDERK KSDFKSWDDF 
IGRVKGVGPG NAARFSEAGL TVNGSAFAAA ATAAKPGVVA KADKAVKDK