Gene Lcho_0972 details

Gene Information

• Locus tag: Lcho_0972
• ID: 6163036
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 1038303
• End bp: 1038974
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641663723
• Product: hypothetical protein
• Protein accession: YP_001790009
• Protein GI: 171057660

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 72
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGATCAGAT TATTTGTCGG TTTCGATCCG CGGGAGGCCG TGGCCTACCA CACGTTCTGC 
CAGAGCGTTC TGGAGTCGGC GTCGGTTCCT GTGGCCTTCA CTCCGTTGGT GCTGCAGTCA 
TTGCCGCGAT ACAAAGAAAC ACACAACGAT GGCAGCAATA CCTTTATCTA TTCGAGGTTC 
CTGACCCCGC ATCTGTGCGA ATTCGAAGGT TGGGCGATTT TTGCGGACGG CGACATGGTC 
TGCCGATCGG ACATTGCCGA ACTGTGGAAC TTGCGTGACG AGAGCAAGGC CGTACAGGTC 
GTGCAGCACA GTTACCAGAC CAAGGCCACG ACCAAGTATC TCGGTAACAA GAACCAGAAT 
TACCCGCGCA AGAACTGGTC GAGCGTGGTG CTCTGGAATT GCGGTCATGC CAAGCATCGA 
ATGCTGACAC CCGAGTTCGT GATGGGCCAG ACGGGCGCAT TCCTGCATCG CTTCAGTTGG 
CTGGGCGATG CCGACATCGG AGCGCTGCCC GTCGAATGGA ATTGGCTGAC GACCGAATAC 
GAAGACAATG CCGACGCCAA GTTGCTGCAC TACACATTGG GAACGCCCTG TTTCAAGGAT 
TATGTCGATG CCGACATGGC CGAGGAATGG CACGCCGCCC GTGCGCGATC TCAGGACGGA 
ATGAATGTCT AG 

 

Protein sequence

MIRLFVGFDP REAVAYHTFC QSVLESASVP VAFTPLVLQS LPRYKETHND GSNTFIYSRF 
LTPHLCEFEG WAIFADGDMV CRSDIAELWN LRDESKAVQV VQHSYQTKAT TKYLGNKNQN 
YPRKNWSSVV LWNCGHAKHR MLTPEFVMGQ TGAFLHRFSW LGDADIGALP VEWNWLTTEY 
EDNADAKLLH YTLGTPCFKD YVDADMAEEW HAARARSQDG MNV