Gene Lcho_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0950 
Symbol 
ID6160164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1014244 
End bp1014867 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content58% 
IMG OID641663701 
Productresolvase domain-containing protein 
Protein accessionYP_001789987 
Protein GI171057638 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones108 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATCC GCGCTTACCT CAGAGCCTCG ACCGAAGACC AGAACGCCGA CCGCGCCCGC 
GCCGACCTTG AGAAGTTCGC TGCCGATCAT GGCGTGAAGA TCGTCGCCCT CTACAGAGAG 
AACGAATCGG GCGCAAAGCT CGACCGGCCG AAACTCTTCG ACCTCATCAA CGACGCGCAC 
CCCGGTGACG TGCTGCTGAT TGAACAGGTC GACCGCCTGA CGCGCCTCAA CGCCACTGAC 
CGGGAAAAGC TGTTCAAGGC GCTGGACGAC AAAGGCATTC TCGTGGTGTC GCTCGACCTG 
CCGTTGTCGC ATCAGGCGCT CAAGCAAGAC ACGGCAATGG ACGAAACCAC CCGCGACATA 
CTGAAGGCGA TGAACCGGAT GATGTTGCAG ATGTTTGCCG CGTTCTCCCG CAAGGATTAC 
GAAGATCGCC GCCGTCGTCA GGCTCAAGGA ATCGCCACGA ACAAGGACAA ATTCAAGGGC 
CGTCCCGAAG ACACCAAAAC GAATGACCAC GTGCGTGACC TGCTGCTGAC CGGGAAATTC 
TCATGGACGT ACATCGAAGA GCATGCGAAG GTCAGCCGCT CCACGATTGC CAAGGTTGCA 
AAACGCATCA ACGAAGGCGC TTAG
 
Protein sequence
MFIRAYLRAS TEDQNADRAR ADLEKFAADH GVKIVALYRE NESGAKLDRP KLFDLINDAH 
PGDVLLIEQV DRLTRLNATD REKLFKALDD KGILVVSLDL PLSHQALKQD TAMDETTRDI 
LKAMNRMMLQ MFAAFSRKDY EDRRRRQAQG IATNKDKFKG RPEDTKTNDH VRDLLLTGKF 
SWTYIEEHAK VSRSTIAKVA KRINEGA