Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0944 |
Symbol | |
ID | 6160225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1007194 |
End bp | 1007616 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641663695 |
Product | UspA domain-containing protein |
Protein accession | YP_001789981 |
Protein GI | 171057632 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 118 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCC TGGTTGCTGT CGATGGCAGC GAATACACCC GCCGCATGGT CGCCTATTGG GCTGCCCATG ATGAATGGCT GGGGCCGGCG CACGAGTACA CCGTGCTGAC CGTGGTGCCG ACCATTCCGC CTCGTGCTGC GGCCGTGCTC GATCGGGAAC TGCTGCAAGG CTATTACGCC GATGAGGGCG AAAAGGTTTT CAAGCCGCTG CGCACGTTTC TCGATGCCCA GCGCATCAGC GCGACTTTCC TCAGCAAGAC CGGTCATGTG GCCGATGCCA TCGCCAAGAC CGCCGACGAG GGGCATTTCG ATCTGGTCAT GATGGGCTCG CACGGCCACA ACCAGCTGGG CAATCTGGTG ATGGGCTCGG TGGCGACGCG CGTCATTGCG GCTTGCAAGA CGCCTGTTCT GCTGATTCGC TGA
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Protein sequence | MKILVAVDGS EYTRRMVAYW AAHDEWLGPA HEYTVLTVVP TIPPRAAAVL DRELLQGYYA DEGEKVFKPL RTFLDAQRIS ATFLSKTGHV ADAIAKTADE GHFDLVMMGS HGHNQLGNLV MGSVATRVIA ACKTPVLLIR
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