Gene Lcho_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0934 
Symbol 
ID6159779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp997676 
End bp998233 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content69% 
IMG OID641663684 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_001789971 
Protein GI171057622 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones126 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC CCGTCGCGCC CGATGCCCAG GGCACCTCGA CCCGGCCCTA TCTGATCCGT 
GCCTTGCACG ACTGGTGTAC CGACAACGGC TTCACGCCGT ACTTGGCGGT CTACGTCGAC 
GCCAGCGTGC AGGTGCCGAT GGAGTACGTG AAGAACCACG AGATCGTGCT GAACGTCGGT 
TTCGACGCCA CCAGCGGGCT TCGCCTGGGC AACGAGTTTG TCGAGTTCAA GGCGCGCTTC 
GGCGGGGTCG CGCGCGAGAT CGTCGTGCCC ATCGACCATG TGATCGCGAT CTACGCGCGT 
GAAAACGGTC AGGGCATGGC GTTTCCGGTG CCGACCGATG CATCGCAAGC CGGGGCTTCC 
GCCGGTGCCG GCACCGAGAT GTCGCCCGGC TCGACCACCG TGCCGACGGT GACCGGCCTG 
CGCCTGGCGA GCGCCCCGGT TGGCGACTCG CCGTCGCCGA CGGTGGAACC ATCGCCGGCG 
CCGGTCGCCG ACGACCACGA GCCCACGCCG CCGCCATCGA CGGGTGGCAG CCGCCCGTCT 
CTCAAGCGGG TGAAGTGA
 
Protein sequence
MPTPVAPDAQ GTSTRPYLIR ALHDWCTDNG FTPYLAVYVD ASVQVPMEYV KNHEIVLNVG 
FDATSGLRLG NEFVEFKARF GGVAREIVVP IDHVIAIYAR ENGQGMAFPV PTDASQAGAS 
AGAGTEMSPG STTVPTVTGL RLASAPVGDS PSPTVEPSPA PVADDHEPTP PPSTGGSRPS 
LKRVK