| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0922 |
|---|
| Symbol | |
|---|
| ID | 6159903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 986912 |
|---|
| End bp | 987841 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641663672 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001789959 |
|---|
| Protein GI | 171057610 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 100 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCGA GTCGCCTTCT GCCGGGCAGC GGCCTGGCCG TGCTGGCGCT GCTGTTCAAT
GCGCTGACCT GGGGCCTGTC ATGGTGGCCG TTTCGCGAGC TGCAGGCGGC CGGCCTGCAT
TCGCTGTGGA GCACGGTGCT GATCTACGGC GCCGCCGCGC TGGTGGTCGG CCTGTGGCGG
CCGCGGGCCT GGGGCCAGCT GGCGCGATCG CCGGCGCTGT GGCTGATCAT GCTGGCGTCG
GGCTGCACCA ACCTCGGCTT CAACTGGGGC GTGACGGTGG GCGATGTCGC CCGGGTCGTG
CTGCTGTTCT ATCTGACGCC GCTGTGGACG CTGCTGCTGG CGCGCTGGCT GCTCGGTGAA
CACGCCGATG CGGCCGTCTG GCTGCGGGTG GCGATGGCGC TGGGCGGCGC GGTGCTGGTG
CTGACCTCGT CCCATGCCGC CGAGTCGGCC GACGGCGCGG CACGGGCCGT CTCGATGCCC
TTGCTGGCCG ACGTGCTGGC GATCGGCGGC GGCTTCTTCT TCGCGCTCAA CAACGTGATG
CTGCGCCGCG CCGCCCATCA CCCCGACGAG GGGCGGGCGC TGGCGATGTT CGTCGGCGGC
ACGCTGGTGT CTCTGCTGGT CGCCACGCTG GGTGCGGCGG ACGTCGGCGT CATGGCGCTC
AGCCGGATCG ACTGGCCGCC GATGCCCGCG GCGAGCTGGG TGCTGCCGGC GCTCGGCCTG
GCGGTGGCTT TCCTGTTCGC CAACCTGGCG CTGCAATACG GCGCCACCCG CCTGCCGGCC
AATGTCACCT CGGTCGTGAT GCCCAGCGAG ATCCTGTTCG CGGCGGTCTC GGCCGCCTGG
TGGGCTGGCG AGGTGATGAC GCCGATGCTG CTGGTCGGCG GGGCGCTGAT CCTGGGCGCC
ACGCTGCTCG CGGCCTGGCA GCACGCCTGA
|
|---|
| Protein sequence | MSSSRLLPGS GLAVLALLFN ALTWGLSWWP FRELQAAGLH SLWSTVLIYG AAALVVGLWR
PRAWGQLARS PALWLIMLAS GCTNLGFNWG VTVGDVARVV LLFYLTPLWT LLLARWLLGE
HADAAVWLRV AMALGGAVLV LTSSHAAESA DGAARAVSMP LLADVLAIGG GFFFALNNVM
LRRAAHHPDE GRALAMFVGG TLVSLLVATL GAADVGVMAL SRIDWPPMPA ASWVLPALGL
AVAFLFANLA LQYGATRLPA NVTSVVMPSE ILFAAVSAAW WAGEVMTPML LVGGALILGA
TLLAAWQHA
|
|---|
| |