| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0920 |
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| Symbol | |
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| ID | 6159901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 984281 |
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| End bp | 985414 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663670 |
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| Product | alanine racemase |
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| Protein accession | YP_001789957 |
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| Protein GI | 171057608 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 95 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCC CGATCGAAGC CCTGATCCAC CCGGATGCCC TCGCCCACAA CCTGCTGCAG
GCGCGCCGAC ACGCCGGTGA CGCCAAGCTG TGGGCCGTCA TCAAGGCCAA TGCCTACGGG
CATGGCATCG AGCGCGTCTG GCCCGCGCTG CTCGGTGCCG ACGGCCTGGC GATGCTCGAT
CTCGACGAGG CCCAGCGCGT GCGCAACCTC GGCTGGCGCG GCCCGGTGCT GCTGCTCGAA
GGCTGTTTCG AGGCGCGCGA CCTCGAACTG TGCTCGCGCC TGAACCTGTG GCACGTGGTG
CACCACGACG ACCAGATCGG CTGGCTGGCC GCGCACAAGA CCCACCAGCC GCACCGCGTG
TTCCTGAAGA TGAACAGCGG CATGAACCGG CTCGGCTTCA CGCCGCAGGC CTTGCGCAGC
GCCTGGGTGC GGCTGAACGC GCTGCCGCAG GTCGACGAGA TCTCGCTGAT GACGCACTTC
TCGGACGCCG ACTCGCCGCG CCCGGGCGCC GACGGCATCG CTGCCCAGGT GGCGCGTTTC
GTCGAGGCCA CGCACGACCT GCCGGGCGAA CGCAGCCTGA GCAACAGCGC GGCGATCCTG
CGCCACTGCG AACGCGCCGA GGTGCGCGCC GACTGGGTGC GCAGCGGCAT CCTGAGCTAC
GGCAGCTCGC CCGACCACCC GCAGCACGAC ATCGGGCACT GGAACCTGCG CCCGGCCATG
ACGCTGCGCA GCCGCCTGAT CGCCACCCAG CAACTGCAGG CCGGCGACAG CGTCGGCTAC
GGCAGCCGGT TCGTGGCGCA GCAGCCGATG CGCATCGGCA TCGTCGCCTG CGGTTATGCC
GACGGCTACC CGCGCCACGC GCCCGGTGAC ACCGGCAACG CCACGCCGGT GCTGGTCGAC
GGCTTGCGCA CGCACACCGT CGGCCGCGTC TCGATGGACA TGCTGGCGGT CGACCTGAGC
GAGCTGCCGG CGGCCGGCGT CGGCAGCGAA GTCACGCTCT GGGGCCACGG CCCGCACGGC
AGCCTGCTGC CGATCGACGC GGTGGCGCAG GCCGCCGGCA CGATCGGCTA CGAACTGATG
TGCGCGCTGG CCCAGCGCGT GCCCACCCAT GTGCAAGACC TCGAGCCGCG CTGA
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| Protein sequence | MPRPIEALIH PDALAHNLLQ ARRHAGDAKL WAVIKANAYG HGIERVWPAL LGADGLAMLD
LDEAQRVRNL GWRGPVLLLE GCFEARDLEL CSRLNLWHVV HHDDQIGWLA AHKTHQPHRV
FLKMNSGMNR LGFTPQALRS AWVRLNALPQ VDEISLMTHF SDADSPRPGA DGIAAQVARF
VEATHDLPGE RSLSNSAAIL RHCERAEVRA DWVRSGILSY GSSPDHPQHD IGHWNLRPAM
TLRSRLIATQ QLQAGDSVGY GSRFVAQQPM RIGIVACGYA DGYPRHAPGD TGNATPVLVD
GLRTHTVGRV SMDMLAVDLS ELPAAGVGSE VTLWGHGPHG SLLPIDAVAQ AAGTIGYELM
CALAQRVPTH VQDLEPR
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