| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0907 |
|---|
| Symbol | |
|---|
| ID | 6162102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 971271 |
|---|
| End bp | 972233 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641663657 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_001789944 |
|---|
| Protein GI | 171057595 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCG GGATGAGCCT GATGAAGCAC TACCTGCAGT TCAAGGACCT GCGTGCCGAG
GAGTACGCCT ACCTGTTCGA GCGCGCCCGC AACATCAAGA CGCGCTTCAA GAACTACGAG
AAGTACACGC CGCTGGTCGA CCGCACGCTG GCGATGATCT TCGAGAAGGC CAGCACCCGC
ACCCGCGTGA GCTTCGAGGC CGGCATGTAC CAGATGGGCG GCTCGGTGGT GCACCTGACC
ACCGGCGACA GCCAGCTCGG CCGCAGCGAG CCGGTGGAGG ACTCGGCGCG TGTCATCAGC
CGGATGGTCG ACATCGTCAT GATCCGCACC TACGAGCAGA CCAAGATCGA GCAGTTCGCG
GCCCACTCGC GGGTGCCGGT CATCAACGGG CTGACCAACG AGTTCCACCC GTGCCAGATC
CTGGCCGACC TCTACACCTG GCTCGAACAC CGCGGCACGC TCAGCGCGGC GGGCGTCGAC
CTGTCGTGCC TGAAGGGCCG CGTGGTGGCG TGGGTCGGCG ACGGCAACAA CATGGCCAAC
ACCTGGCTGC AGGCGGCCGA GATCCTCGGT TTCACGGTGC ACGTCAGCAC GCCGGGCGGC
TACGAGGTCG ACCCGGTCGT GGCCGGCATC GCCAGCAGCG ACTGCTACAA GGTCTTCGAC
GACCCGCGCG AAGCCTGCCG CGGCGCCGAC CTGGTCACCA CCGACGTCTG GACCAGCATG
GGCTACGAGG CCGAGAACGA GGCACGCAAG AAGGCCTTCG CGCTCTGGTG CGTCGACGCC
GCCATGATGG CCGCGGCCAA GCCCGACGCG CTGTTCATGC ACTGCCTGCC GGCGCACCGC
GGCGAGGAAG TGACCGCCGA CGTCATCGAC GGCCCGCAGA GCGTGGTCTG GGACGAGGCC
GAGAACCGCA TGCACGTGCA GAAGGCGCTG ATGGAGTACC TGCTGCTCGG GCGCATCGGC
TGA
|
|---|
| Protein sequence | MKPGMSLMKH YLQFKDLRAE EYAYLFERAR NIKTRFKNYE KYTPLVDRTL AMIFEKASTR
TRVSFEAGMY QMGGSVVHLT TGDSQLGRSE PVEDSARVIS RMVDIVMIRT YEQTKIEQFA
AHSRVPVING LTNEFHPCQI LADLYTWLEH RGTLSAAGVD LSCLKGRVVA WVGDGNNMAN
TWLQAAEILG FTVHVSTPGG YEVDPVVAGI ASSDCYKVFD DPREACRGAD LVTTDVWTSM
GYEAENEARK KAFALWCVDA AMMAAAKPDA LFMHCLPAHR GEEVTADVID GPQSVVWDEA
ENRMHVQKAL MEYLLLGRIG
|
|---|
| |