| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0878 |
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| Symbol | |
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| ID | 6163566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 941264 |
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| End bp | 942208 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663628 |
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| Product | fatty acid desaturase |
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| Protein accession | YP_001789915 |
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| Protein GI | 171057566 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3239] Fatty acid desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGC CTTCGGACAT CACCTCGGAC CTGGCTGCGC TGCGCGCGCA GTTGCACGAG
AGCGGCTCGC CCCATCGGGC GCTGCTGCAA CTCGACCCGT GGCGCTCGAT CATCGACCTC
CTGATCGATC TGGCCCTCGT CGGGTCCTCG GTGGTTGTGG TCATCGAATG GGGGCTCGGA
TGGGCCCCTC TGGCGATCCT GCTGTTGGGC AACCGGCAGC GCGCCTTGGG CAACCTCCTG
CACGATGCCG GGCATCGCAA CCTGTGCTCA CGCCGATGGG TCAATGACGG GATCGCGCGC
TGGCTGCTTG CCCCGTTGCT GTTTGCGAGC CTGAGCCTCT ACCGGACGAC GCACTTCCGG
CATCACCAGT GGCTGGGTCG GGCCGATGCG GATCCGGACT TCCTGGTGCC CCCGGCGGCG
ATGCCGAAGC ACTGGCTCTC GCGCTTCCTG GCATGCGCGG GCAGTGGCTC TGCGTGGCGG
GGCTCCTTGT GGGGGCATCT GGTCCACGCG GAGGTTTCCG GAGCCGGTCG CTCGTACATC
GTGGTCTGGT GGGCGGTGGC ACTCGGTCTC ATGGTCCTGG CGGCCGGTGC ATCCTTCACG
GCGCACTTCG TCGGCCTGTG GCTGGTGGCT CGGGCGACGA CGTTCCACCT GATCACGACC
TTTCGCGAGA TGTGCGACCA CCACGGACTG GTGCCGGGTG GGGTGTTCTC GTTCACGCGT
GATGTGGCCT GCCATGGGCT GCTGCGGGCC TGCATCCATC CCCGCAACAA CGGCTACCAC
CTGACTCACC ACCTGCTGCC GGCCGTTCCC TACTACCGCT TGCCGCAGGC GCATCGGCTG
CTGAATCGGT TGCCCATCGT GCATGCCCGA GGGCAGGTGT GCGATGCCTA CTTCACCGGC
CCGCGTGCGG TGGTTCACGC CTGGCAATCG GACACGAATC GATGA
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| Protein sequence | MATPSDITSD LAALRAQLHE SGSPHRALLQ LDPWRSIIDL LIDLALVGSS VVVVIEWGLG
WAPLAILLLG NRQRALGNLL HDAGHRNLCS RRWVNDGIAR WLLAPLLFAS LSLYRTTHFR
HHQWLGRADA DPDFLVPPAA MPKHWLSRFL ACAGSGSAWR GSLWGHLVHA EVSGAGRSYI
VVWWAVALGL MVLAAGASFT AHFVGLWLVA RATTFHLITT FREMCDHHGL VPGGVFSFTR
DVACHGLLRA CIHPRNNGYH LTHHLLPAVP YYRLPQAHRL LNRLPIVHAR GQVCDAYFTG
PRAVVHAWQS DTNR
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