| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0877 |
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| Symbol | |
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| ID | 6163565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 940530 |
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| End bp | 940955 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663627 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789914 |
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| Protein GI | 171057565 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3602] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGCG AATGCGACCT CGAGCGACTG GTGCGCCACT TGGCGCCCAA GCTGCATGCA
GACCACTACG TCTACTGCAG CTTCGCAGAC CACCGCCTGC CGGACGGCCT GCAGCCGCTG
TGCACCTTCC GGGAAGCCGA GGGACTGACG GCCATCGTCG AACGAACGCA GGCCGAGTCC
GCGCGGGTGC CATTCGTGTT CGAGGCCCGG CTCATCACGC TGACCGTCCA CTCCTCGCTC
GAAGCCATCG GCCTACTGGC GACGGTCGCT TCGAAACTGG CCGCCGCCGG CATCCCGTGC
AACGCCATCG CGGCCTACCA CCACGACCAC ATCCTCGTGC CGGTGGCCCA GGCCCAGCAG
GCTCTTGCGG TGCTGCAGCG GATCGCGACA GGCTCAGTCC ATGAGCCATC GCCAAACACT
GTTTAG
|
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| Protein sequence | MSGECDLERL VRHLAPKLHA DHYVYCSFAD HRLPDGLQPL CTFREAEGLT AIVERTQAES
ARVPFVFEAR LITLTVHSSL EAIGLLATVA SKLAAAGIPC NAIAAYHHDH ILVPVAQAQQ
ALAVLQRIAT GSVHEPSPNT V
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