| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0875 |
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| Symbol | |
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| ID | 6163595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 938995 |
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| End bp | 939759 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663625 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001789912 |
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| Protein GI | 171057563 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCCT GCATCGGCCT ACTCGACGCG GACCAGGCCT ACTTCGTCAC CTTCGTGCGC
GATGACCATG ACCTCGTGAT CTGCCGATTC ATGCTGGCCT GCGATGCCCG CTGGTGCCGG
CGCTACCTCG CGGCGGGATG CCAGAACCAC GACCCCTGGC TGGTCTACGC CACCCACCAC
TCCGAGCCGA CGGCCGCCAG TGCCCTCGAC GTGGTCGCGA CCGAGCACCG CCAGGTTGTT
GCATTGATCC ACGAAGGGGG CTTTGTCTCG ACCCTGCTGG TCCCGGCGCA TTCAGGCCTG
AGCCAGGCAC GCACCAGCCT GCTGTGCCTG GGCTCGGAGA CGGTGGACCA CTTCGAGCGA
CGTGATTCGG CGGGTCACCG GATCCTTGCC CGCGCGCTGG CGGCGGAACT GCACGAGTGG
TGGAGCGCCC GTATCCGCCG CGAATTGGTC GAGGCGGCCC AGCTGACGCC AACCGAGCTG
TCGCTGGTGC GGCACCAATG CGCCGGCCAC AGCAGCAAAC GCATCGCATC TGAACTGCAC
GTGAGCCCCG CGTCAATCGA CTCCCGCTTC CAACGCCTGC ACGCCAAGTT GGGGGTGCTC
AACCGGCGCC AAGCTGCCCG CCTGCTGGTG GACTGCGGTC TGATCCTGCC GTCATTCAAC
AGCCGCCGGG CCCTGGGCCC GATGCAGATA GAGCCGATCA ACACGGGCGT CTCGACCGGG
TCGTCTTCGG GCGCATCAAG GGCCCCGCCT CCCGTCGAGC GATGA
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| Protein sequence | MQACIGLLDA DQAYFVTFVR DDHDLVICRF MLACDARWCR RYLAAGCQNH DPWLVYATHH
SEPTAASALD VVATEHRQVV ALIHEGGFVS TLLVPAHSGL SQARTSLLCL GSETVDHFER
RDSAGHRILA RALAAELHEW WSARIRRELV EAAQLTPTEL SLVRHQCAGH SSKRIASELH
VSPASIDSRF QRLHAKLGVL NRRQAARLLV DCGLILPSFN SRRALGPMQI EPINTGVSTG
SSSGASRAPP PVER
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