Gene Lcho_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0874 
Symbol 
ID6163594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp938318 
End bp938878 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content70% 
IMG OID641663624 
Producthypothetical protein 
Protein accessionYP_001789911 
Protein GI171057562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC ATCGTTCTGC ATCCATCGCC CGCCGCATGC CGGCACACGC ACTGTGGCGT 
GCCTTCGCCC TGCCGTGTCT CGCCGTCGCC GCGATGGCCG GCGCACCCGC ACCGGCGCAT 
GCCGTCGATG GCTGCCAGGT GCTGCTGTGC TTCGCTGCCC CCAACTGGCG CAAGGTGCCG 
CAGTGCGTGC CACCGATCCG GCAGGTGCTG CGCGACCTCG CGCGCGGCCG CGCCTTCCCG 
ACCTGCGCGA TGAGCGGTGC AGGCAACTCG GCCCAGCACA ACTGGGCTGC GGCGCCGACC 
AACTGCCCGC CGCAGTACAC CCGCCTGGTC GAGACCGACA CCGGCTCGTC CTACACCTGC 
GACTACACAG GTGCGATCTC GGTCGTGGTC GAAGGCGCCG CGTTTGCCAG GACCTGGTGG 
AACATGGCCG GTGACACAGT CACCGAGTTC AGCCCGGCGG CCAAGGCACA AATGGGCAGC 
TGGGACACGC GCTACGACGA CGAGTACCAG GCCTGGACCG GTGCGCAGGC TTCCGTGCCG 
GTCGCGCCCT CGATACCTTG A
 
Protein sequence
MTTHRSASIA RRMPAHALWR AFALPCLAVA AMAGAPAPAH AVDGCQVLLC FAAPNWRKVP 
QCVPPIRQVL RDLARGRAFP TCAMSGAGNS AQHNWAAAPT NCPPQYTRLV ETDTGSSYTC 
DYTGAISVVV EGAAFARTWW NMAGDTVTEF SPAAKAQMGS WDTRYDDEYQ AWTGAQASVP 
VAPSIP