Gene Lcho_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0853 
Symbol 
ID6160412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp915515 
End bp916072 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content68% 
IMG OID641663603 
Productflavin reductase domain-containing protein 
Protein accessionYP_001789890 
Protein GI171057541 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCA TGCCAGCCCT GGAAGAGAGA CAGCTCAGCC TGTCCGCCAA CCTGAAAGAA 
GCGATGCGCC GCCTCGCGAG TTCGGTGGCC ATCATCACCA GCCGCGATCA GGACGGCCAG 
CCGCACGGCA TGGCGGCGTC GGCCGTGATC CCGGTGTCGA TGGATCCGCC GTCGATGCTG 
GTGGCGGTCA ACCGCGACGC TGGTCTGCAC CCGGTGCTGC AGCGCTCGGG TCGCTATTGC 
ATCAACCTGC TGGCCGACGA CCAGCACCTG CTGCTCAAGC CGTTTTCGCA GACCGCACTG 
CGCGATCAGC GCTTCCGCTC CGATGACTGG CGCGACGCCT GGTCGCCCGC CGACGGCCCG 
CTGCCCTGGC TCGATGGCGC ACCCGCCGCG ATCGAGTGCG AGGTCGACCA GTTCATGGAC 
TACGGCACCC ACACGCTGTT CGTCGGTCGC GTCGTGAACG TGCGCTGCGC GTCGGCCGAA 
TCCTCGACCG GCACCACCGC GCCGCAGCCT CTCGTCTGGC TGGCTGGCCA ACGCGCCCGA 
CTCGTCTCGC CCATCTGA
 
Protein sequence
MSAMPALEER QLSLSANLKE AMRRLASSVA IITSRDQDGQ PHGMAASAVI PVSMDPPSML 
VAVNRDAGLH PVLQRSGRYC INLLADDQHL LLKPFSQTAL RDQRFRSDDW RDAWSPADGP 
LPWLDGAPAA IECEVDQFMD YGTHTLFVGR VVNVRCASAE SSTGTTAPQP LVWLAGQRAR 
LVSPI