| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0851 |
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| Symbol | |
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| ID | 6160784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 912555 |
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| End bp | 914231 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663601 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001789888 |
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| Protein GI | 171057539 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTAC GAAAAATGAA GTTCGCCCGT GCGATCGGCG TGATGGCGGC ATTGGCCGTC
ACGACGATCG GCACGATGGT CTCGGCCGCC ACCGGCCCGG GCTACGACGA TCCGACCAAC
TGGCCGCAAT ACCACCGCAG CTACAACGCC TGGCGCTTCA GCCCGCTCGA CCAGATCAAC
AAGGCCAACG TCAAGCGCAT GCACGTGGCC TGGATCCATC AGCCCGGCGC GGTCACGCAT
GGCCTGCAGG CCACGCCGAT CGTGATCGAC GGCGTGATGT ATTCGATCGC CGCCGACAAC
AACGTCTTCG CGCTGAACGC GGCGACCGGC GCGGTGCTGT GGCGCTACAC GCCCAAGCTC
GATCCGGTCG TGCGCGAGGT CTTTTACGGC TCGGCCAGCC GCGGCGTGAC CGTGGGCCGC
GGCAAGGTCT ACATCGGCTC GCTCGACGGC CGCTTCATCG CGCTGGACCA GAAGACCGGC
AAGGAGCTGT GGAGCACCCA GCTCACCAAC ATGCGCGCCG AAGGCGGCGC CCTGTTCTCG
TCGCCGCCCC AGCTCGCGGG CAACACCCTG TTCGGCGGCA CCACCGGTGG CGACCAGCCG
ATCATCGGCA AGATCTACGC CGTCAACGCC GACACCGGCG AGCGCACCTG GACCTTCGAG
ATCCCGCGCG ACGACCCCAA GAGCTGGCCC GGCGACAGCC GCAAGCGCGG CGGCGGCTCG
GCCTGGCTGC CGGGCACCTA CGACCCGACT TCCGACACGA TCTACATCGG CACCAGCAAC
GCATCGCCCG ACTTCAACCG CGACGATCGC ATGGGCGACA ACCTCTACAC CGCGACGGTG
CTGGCGCTCG ATGCCAAGTC CGGCAAGGTC AAGTGGCACC GACAGGAGGT GCCCAACGAC
ACCTGGGACT TCGATGCCGC GTACGAGTCT CTGCTCGTTC CCAGCACCGA CGGCAAGTCG
GCGCTCGTCC ACCTCAACAA GAACGGCTTT GTCTACGTGA TGGACAAGGA CAACGGTTCG
ATGTTGAACG CGTGGCAGTA CACCGAGAAC ATGAACTGGG CCAAGGGCGT CGATCCGAAG
ACCGGTCTGC CGATCGAGCC CAACTACCCG GAAACCGGCA AGACCAAGCT GCATTGCCCG
AACCTGCTCG GCGCCCGCAG CTGGAACCAC GGCGCCTACA ACCCCGGCAC CAAGCTCTGG
TACTCGCACG GCATGGAGGT CTGCAACCAC GTGACCAGCG CCAAGCAGGA GCCGGTGATG
GGCATCAGCT CGCTGACGCT GGGCCTGTCA GACATCCGCC TGACCGACCC GCCCGGCAAG
AAGGCCGACG GCTGGCTCGG GGCTTTCGAT CCGATCACGG GCAAGCAGGC CTGGAAGGTA
CGCTTCGAGA TGCCACCGCT GAGCTCGGTG CTGGCCACCG GCGGCGGCCT GGTCATCACG
GGTGACATGC GCGGCGTGCT CTACGCCTTT GACGCCGACA ACGGCCGGGA GCTGTGGCGC
TTCAACGCCG GCTCCGGTGC ACGTGGCGGC CCGATCAGCT ACTCGGTCAA CGGCAAGCAG
TACATCGCCA TCCCGACCGG CCTGGGCTCG CACGCACCGG GCTTCCTGAC CGGTGCCTTC
CCGCAGATCC GCGACCTGCC CGGCGGCTCG GCGCTGATGG TCTTTTCGGT GGACTGA
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| Protein sequence | MQVRKMKFAR AIGVMAALAV TTIGTMVSAA TGPGYDDPTN WPQYHRSYNA WRFSPLDQIN
KANVKRMHVA WIHQPGAVTH GLQATPIVID GVMYSIAADN NVFALNAATG AVLWRYTPKL
DPVVREVFYG SASRGVTVGR GKVYIGSLDG RFIALDQKTG KELWSTQLTN MRAEGGALFS
SPPQLAGNTL FGGTTGGDQP IIGKIYAVNA DTGERTWTFE IPRDDPKSWP GDSRKRGGGS
AWLPGTYDPT SDTIYIGTSN ASPDFNRDDR MGDNLYTATV LALDAKSGKV KWHRQEVPND
TWDFDAAYES LLVPSTDGKS ALVHLNKNGF VYVMDKDNGS MLNAWQYTEN MNWAKGVDPK
TGLPIEPNYP ETGKTKLHCP NLLGARSWNH GAYNPGTKLW YSHGMEVCNH VTSAKQEPVM
GISSLTLGLS DIRLTDPPGK KADGWLGAFD PITGKQAWKV RFEMPPLSSV LATGGGLVIT
GDMRGVLYAF DADNGRELWR FNAGSGARGG PISYSVNGKQ YIAIPTGLGS HAPGFLTGAF
PQIRDLPGGS ALMVFSVD
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