| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0842 |
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| Symbol | |
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| ID | 6161637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 902334 |
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| End bp | 903149 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663592 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001789879 |
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| Protein GI | 171057530 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGA AGATTGCAGA CTCCGCCGGC GCCGGCTCTG CCAAAGGCAG CAAGGGCACG
CCGCTGATTT CAATGCGGAA CATCACGAAG TCGTTCGGCT CCGTCAGGGC GCTGCGTGGC
GCATCGGTCG AGGTTCACGC GGGCGAAGTG GTCGCCCTGG TCGGTGACAA CGGCGCGGGC
AAGTCGACTT TCGTCAAGGT CATGGCGGGC GTGCACGGGT TCGATACGGG CGACTACGAG
ATCGACGGCA AACCCGCCAA GATCAACAGC CCGTCGGATG CGACCGGCTA CGGCATCCAG
ACGGTCTACC AGGACCTGTC CCTCTGCAAC AACCTCGATG CGGTGCAGAA CCTGTTCCTG
GGGCGCGAGC TGACCGGGTC CGGTTGGTTC GGCCGGCGCA TCAATCGTGC CGAATGCGAA
ATCCGGGCGC GCGAGGTCAT GACCCGCATG CGACTGGGAA ACCTCTCCCT GAGCCGCCCG
GTGGGCGCGA TGTCGGGTGG GCAACGGCAG AACATCGCCA TCGCCCGGTC GATCCTGTGG
ACCCCCAAGC TGCTGATCCT CGACGAGCCG ACCGCGGCGC TGAGTCACTC GGCCGCCGAG
CAGGTGTCCA AGCTGATCCG CACGCTGGCC GACGAAGGCC TGGGGATCGT GGTGGTCAGC
CACGACATCC ACCACTTCGT CGTCAAGTCC ACCGACCGCA TCGAAGTCAT GCGACTCGGT
GCCAACACGG CCAGCTTCAA GTCCAGTGAA GTCACTGGCG AGCAAGTCGT GAACGCCATG
GTCGGCGGCA ACGAGAGCGT GAATCTGGCG GGCTGA
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| Protein sequence | MTEKIADSAG AGSAKGSKGT PLISMRNITK SFGSVRALRG ASVEVHAGEV VALVGDNGAG
KSTFVKVMAG VHGFDTGDYE IDGKPAKINS PSDATGYGIQ TVYQDLSLCN NLDAVQNLFL
GRELTGSGWF GRRINRAECE IRAREVMTRM RLGNLSLSRP VGAMSGGQRQ NIAIARSILW
TPKLLILDEP TAALSHSAAE QVSKLIRTLA DEGLGIVVVS HDIHHFVVKS TDRIEVMRLG
ANTASFKSSE VTGEQVVNAM VGGNESVNLA G
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