| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0833 |
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| Symbol | |
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| ID | 6160644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 893825 |
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| End bp | 894526 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663583 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001789870 |
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| Protein GI | 171057521 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 99 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA AGCTGTATCC CTCGACGCAG GCGGCGCTGG CCGACCTGCG TGACGGCGCC
ACGGTGATGA TCGGTGGCTT CGGCACGGCC GGGCTGCCCA ACGAGCTGAT CGACGCATTG
ATCGAACAAG GCGCGCGTGA CCTGACGATC GTCAACAACA ACGCCGGCAA CGGTGACACC
GGTCTGGCCG CCTTGTTGGC GACCGGGCGG GTGCGCAAGA TCATCTGCAG CTTTCCGCGC
CAGGCCGATT CGTGGCACTT CGACCGCCTG TACCGCGAAG GCCGCATCGA GCTGGAGCTG
GTGCCGCAGG GCAACCTGGC CGAACGCATC CGCGCCGCGG GCGCCGGCAT CGCCGGCTTC
TTCACCGCCA CGGGCTACGG CACGCTGCTG GCTGAGGGCA AGGAGACCCG CGTCATCGAC
GGCCGCGGCT ACGTGCTGGA GCAACCCATC CACGCCGACG TCGCGCTGAT CAAGGCCGAG
CGCGGCGACC GCTGGGGCAA CCTGACCTAC CGGATGACCG CGCGCAACTT CGGGCCGATC
ATGGCCGCAG CGGCTAGCAC CACGATCGCC AGCGTGCACG AGTTCGTCGA ACTCGGCAGC
CTCGACCCCG AAAGCATCGT CACCCCTGGC CTCTACGTGC AGCGGGTGGT TCAGATTGAG
CGGGCCATCA CCACTGCCGG CGGTTTCAAG ACCGCCGCGT GA
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| Protein sequence | MIDKLYPSTQ AALADLRDGA TVMIGGFGTA GLPNELIDAL IEQGARDLTI VNNNAGNGDT
GLAALLATGR VRKIICSFPR QADSWHFDRL YREGRIELEL VPQGNLAERI RAAGAGIAGF
FTATGYGTLL AEGKETRVID GRGYVLEQPI HADVALIKAE RGDRWGNLTY RMTARNFGPI
MAAAASTTIA SVHEFVELGS LDPESIVTPG LYVQRVVQIE RAITTAGGFK TAA
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