| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0825 |
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| Symbol | |
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| ID | 6163386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 888870 |
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| End bp | 889280 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641663575 |
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| Product | cupin 2 domain-containing protein |
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| Protein accession | YP_001789862 |
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| Protein GI | 171057513 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 108 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAGC AAGCGCATTT CCTTCCATTC GCCTCCTTGC CCGAGATCGC GCGTGGCAAC
GGCATCGTCA ACTACCTCAT CGCGAGCAAG AAGGTGGGGG CACGCGCCAT GCACACCGGC
ATCACGATGC TGCCGGTGGG TGTGCCGGCA CCGAGACATT CCCACAACGC CGAAGAGCAG
GTCACCGTTC TGGAAGGCCG GGTGAAGATC GTGCTGGAAG ACCGCGAGCA AGTCTGCAGC
CGCTTCGATT CCACCTTCAT CTCGGCCGGT GTCGTACACG AACTCGTCAA CGTGGGCGAT
GCGCCGGCCT ACGTGCTGGT GGTCTACGGT TCGCCGGACG TGGACCGCAC CTTCGCGGCA
ACCGGCGAGA CCGTCGCCAT TGGCTCGGAC GGCGATCGAT TCGTCCGCTG A
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| Protein sequence | MSKQAHFLPF ASLPEIARGN GIVNYLIASK KVGARAMHTG ITMLPVGVPA PRHSHNAEEQ
VTVLEGRVKI VLEDREQVCS RFDSTFISAG VVHELVNVGD APAYVLVVYG SPDVDRTFAA
TGETVAIGSD GDRFVR
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