| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0816 |
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| Symbol | |
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| ID | 6163601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 879500 |
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| End bp | 880369 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641663566 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_001789853 |
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| Protein GI | 171057504 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 100 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTGG ACTTGAACGA AACGACGCCC GTGGTGGATG CCGAAAGCCG GGCCTACTCG
GCGCCCGCGC TGGAGAAGGG CCTGGACATC CTCGAGACCC TGTGCCGCAG CGAGCACCCG
ATGTCGCAGA AGGACATTGC GCAGGTGCTA GGCCGCAGCG TGGGCGAGAT TTACCGGATG
ATGGCCTGCT TGGTGAATCG GAACTACGTC ACCCTGGTCG ACGAGAACAA CTACGGCATC
ACGACCAAGC TGTTCGAGCT GTCCCATGTC AACCCGCCGA CTCATCGCCT GCTGTTCGAG
GCCGCGCCGG TCATGCAGCG GCTGGCCAGC GAACTCGACC AGTCTTGCCA CCTGACCGTG
TACGGCCAAG GCAAGCAGGT GGTGCTGTGC AAGGTCGACA CGCCCAGCGG CATGGGCTTT
GCGGTGCGTG CGGGTGCGGA GCTCGACGTG CTGATCTCGG CCTCCGGGCG CGTGCTGCTC
GCATTCCAGG ATGAGGAGAC GCGCAAGCTG CGCATCGAGG AATCGCTGCA ACGACGTCCC
GAACAGGCCG ACCTGCAGAT CGAGAGCATC CTGGACAAGA TCCGGGTCGC AGGCTTCGAG
TCGATCCCCA GCGTGCAGGT GCGCGGGCTG TGGGCGGTGA GCTTCCCGAT CCTGGACACC
CAGGGCCGCG CCATCGCCGC GCTGACGGTG CCCTACGCCG AACGCATGGA CCAGACCCAG
CGCAAGTCGA TTCCCGAAGT GACCGACGCA CTCGGCGCGG CGGCTCGCAA CCTGTCCAAG
CGGGTGGGCG GCATGGTGTC GTCCAGCGGA CTGAATGCCA CCGAGCGCGA GAGCGTCCAG
CGGCGCTCGG CCAAGGGCGC CGGGCGCTGA
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| Protein sequence | MNLDLNETTP VVDAESRAYS APALEKGLDI LETLCRSEHP MSQKDIAQVL GRSVGEIYRM
MACLVNRNYV TLVDENNYGI TTKLFELSHV NPPTHRLLFE AAPVMQRLAS ELDQSCHLTV
YGQGKQVVLC KVDTPSGMGF AVRAGAELDV LISASGRVLL AFQDEETRKL RIEESLQRRP
EQADLQIESI LDKIRVAGFE SIPSVQVRGL WAVSFPILDT QGRAIAALTV PYAERMDQTQ
RKSIPEVTDA LGAAARNLSK RVGGMVSSSG LNATERESVQ RRSAKGAGR
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