| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0807 |
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| Symbol | |
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| ID | 6162149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 869511 |
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| End bp | 871175 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663557 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001789844 |
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| Protein GI | 171057495 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACA TCCTGCGCCA GGCGCCATTC GATCTGGACG AGGAACAGGT CGAGTGGGTC
TGCAACACCA TCGACGGCCT GACGCTGCGA GAGAAGATCG GGCAGCTGAT CAACCTCCAG
ATCCTGCCCG GTGACGAAGA GGCGATCGAG CTGGTCGAGC GGCACCAGCT CGGCGCGGTC
ACCGTCATCA ATTTCTCGGA TCCCGATGCC TGTCGCAGCG TCATCGACGC GGCACGCAAG
GCCTCGCGCA TCCGTCCGCT GGTATCGGCC GACCTCGAAG GCGGCGTCAC CAGCGGGCAC
TTGACGACCA CGTTCCCGAA TCAGCTCGGC TGTGCCGCCG CCGCCTGCCT GGATACCTAT
GGCGAGGCTC TGCGGATGCT GTCGGCGGAA CTCGCCTCGC TGGGCGTGAA CTGGACCTTC
TCGCCGGTCC TGGACGTCAA CCAGAAATTC CAGAGCGCGA TCGTCGGAAC CCGCTCCTAC
GGCAGCAATC CGGACCTGAT CGCGCAGTTG GCCGGACTGC ACATCCAGGT CTTCCAGGAC
CACGGCATCG CCACCACCGC CAAGCACTGG CCCGGCGAGG GTTTCGACGA CCGGGACCAG
CACCTCGTCA CGACCATCAA CCCGATGACG GTCGAGGAAT GGACGGCGGT GTTCGGGCAG
TTGTATGCCC GCGCCATCGA CGCGGGCGTG CTGTCGGTCA TGTCGGCGCA CATCGCGTTT
CCGGACTATC TGCGTCGCGC CGGTCTGTCG TCGATCGAGC TCTATCGACC GGCCTCGATC
TCGCGGCACC TGAACCAGAC GCTGCTGCGC GAGCAGCTGC AGTTCAACGG TCTGATCGTC
TCCGACGCCA CGCTGATGGG CGGCCTCGAA AGCTGGGGCA GCCGCCGGCA ATGGTTGCCC
GAGGTGATCG AGAACGGCTG CGACATGATC CTGTTCTCGC CGTCGGTCGA CACCGACATC
GAGACCTTGC TGGAAGCCGC CGGCAGCGGC GCGCTCAGCC AGCAGCGCAT CGACGCGGCA
CTGGCGCGCG TGCTGGGACT CAAGGCCCGC ATGAACCTGC ACCGTGCCGA GGCCGCAGCG
CCAGTCGACG CCGGCCTGAT CGGCTCGCCG GCCCACAAGG CGGTGATGGC GCGTCTGTCG
GACCTGTCGC CCACCCTCGT CAAGGACGTG CACGGCATCG TGCCGCTGGA CCACAAGGTC
CGCAAGATCC TGATGTTCAA GGAGGAAAAC GTCCATCCGC TGGGCGGCGA TGAATCGTTC
CGCATCCAGC TGGATCGGCT TCTCGCGGCC GAAGGTTTCG AGGTCCATGT CTTCGACCCG
CAGACCGACG ACCTGAGCAT CTGCAAGGCA CACGACCTGA TCCTCTACGT GTTCGCGCAG
GAATCGCAGC TCATGAAGTC GAGGCTCTTC ATCGACTGGG CCCGGCTGCA CGGCGGCACG
ATGCCCGGCA TGTCACGGCT CTGGTGGGAC ACGCCCACCG TCTTCATCTC CTTCGGGCAT
CCGTACTACC TGTACGACGC GCCGCGGGTT CCCTGCCTGA TCAACGCCTA CACGCCGACG
CCCGACATCC AGCGGGCCGT CGTCGACAAG TTGCTGGGAC GCAGCCGTTT CACGGGCAAG
AGTCCGGTCG ACGCGTTCTG CGGCCTGGCT GACGCGCACT TCTGA
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| Protein sequence | MKDILRQAPF DLDEEQVEWV CNTIDGLTLR EKIGQLINLQ ILPGDEEAIE LVERHQLGAV
TVINFSDPDA CRSVIDAARK ASRIRPLVSA DLEGGVTSGH LTTTFPNQLG CAAAACLDTY
GEALRMLSAE LASLGVNWTF SPVLDVNQKF QSAIVGTRSY GSNPDLIAQL AGLHIQVFQD
HGIATTAKHW PGEGFDDRDQ HLVTTINPMT VEEWTAVFGQ LYARAIDAGV LSVMSAHIAF
PDYLRRAGLS SIELYRPASI SRHLNQTLLR EQLQFNGLIV SDATLMGGLE SWGSRRQWLP
EVIENGCDMI LFSPSVDTDI ETLLEAAGSG ALSQQRIDAA LARVLGLKAR MNLHRAEAAA
PVDAGLIGSP AHKAVMARLS DLSPTLVKDV HGIVPLDHKV RKILMFKEEN VHPLGGDESF
RIQLDRLLAA EGFEVHVFDP QTDDLSICKA HDLILYVFAQ ESQLMKSRLF IDWARLHGGT
MPGMSRLWWD TPTVFISFGH PYYLYDAPRV PCLINAYTPT PDIQRAVVDK LLGRSRFTGK
SPVDAFCGLA DAHF
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