| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0775 |
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| Symbol | |
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| ID | 6163975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 837820 |
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| End bp | 838839 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641663526 |
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| Product | integrase family protein |
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| Protein accession | YP_001789813 |
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| Protein GI | 171057464 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000000000364623 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAGCG CTGACCACCG CAAGCCGGCC CCGCCGAGCT TCGCGACGCT GGTCCAGTCC
TTCTTCGCCG AACACCTGAC GCAGCAGCGC GCGTTGAGCC CGCAGACCGT TGCGGCCTAC
CGGGACGCGT TCGTCCTGTT CCTGGACTTC GCCCAGGCGC GACTGCACAA GACGCCCACG
ACGCTGTCGC TCGCCGACCT GACGCCCGCG CTGATCCTGG ACTTCCTCGA TCATCTGGAA
CGCGATCGGC ACAACACCGT CCGCAGCCGC AATGCGCGAC TGGCCGCGCT GCGCTCGTTC
CTGAAGTTCG CGGCTCGCCG AGACGTGACG GCACTTCAGG TCGTCGAGCA TGCGCTGGGC
GTGCCAATGA AGCGCTTCGA GCGGCCGATG TTCGAGTTCC TAACACGCGA GGAGATGCTG
GCCGTGATCG GCGCGCCGGG AGCGGATTGG GTGAGCCAGC GAGACAAGCT GTTGCTGGCC
CTGCTGTACA ACACTGGTGC CCGCGTGTCG GAGGTGATCG GCGTGAAGGT GGGCGACGTC
GTGCTAGCCC CGGCGGCCTG CGTGCATCTG CATGGCAAGG GTCGCAAGCA GCGGTCGGTG
CCGCTCTGGC GATCGACGGT CAAGGTGATC CGCGCCTGGC TGAGGTTCAA CCCGGAACTG
ACTCCGACGT CGGCCCTGCT GCCCAACCGC AGCGGACAAG CGATGACGCG ATCCAACGTG
ACGCAGCGCC TGGCGTTGGC CGTCAAGGCC GCGGCGCTCA CGACGCCGAG CTTGGCCGGG
AGAACGATCT CTCCGCACTG CCTGCGGCAC TCGACGGCTA TGCACCTTCT GCAGTCGGGC
GTGGACATCA GCGTGATCGC CCTGTGGCTC GGGCACGAGA GTCCGGCGAC GACGCACCAA
TACGTCGAGG CCGATCTCGC CATGAAGGAA AAGGCGCTGG CCAGGCTTCA GGATCCCAAC
GTCATCCCAC ATCGGTTCCG GGCAGACGAC GATCTGTTGA AGTTCCTCAA GACCTTGTAA
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| Protein sequence | MSSADHRKPA PPSFATLVQS FFAEHLTQQR ALSPQTVAAY RDAFVLFLDF AQARLHKTPT
TLSLADLTPA LILDFLDHLE RDRHNTVRSR NARLAALRSF LKFAARRDVT ALQVVEHALG
VPMKRFERPM FEFLTREEML AVIGAPGADW VSQRDKLLLA LLYNTGARVS EVIGVKVGDV
VLAPAACVHL HGKGRKQRSV PLWRSTVKVI RAWLRFNPEL TPTSALLPNR SGQAMTRSNV
TQRLALAVKA AALTTPSLAG RTISPHCLRH STAMHLLQSG VDISVIALWL GHESPATTHQ
YVEADLAMKE KALARLQDPN VIPHRFRADD DLLKFLKTL
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