Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0744 |
Symbol | |
ID | 6160729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 790941 |
End bp | 791963 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641663494 |
Product | peptidase M23B |
Protein accession | YP_001789782 |
Protein GI | 171057433 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTT TGATCACCCA TGGCGGGCTC GCGCGTACGC GCTCTTTCCA TGTCGGCCCC CTGCAGTTGG GCGTGATCGT GGCGACGTTC GTCCTGGCGA TGATGATGAT GTCGGGCACC ATCTACCACT TCATCTTCCT CAAGGCCGCC CGCGAAGGCT GGCCGGTGGT CAGTCACCTG ACGGGGCTGG TGGTGCGTGA TGAAACCGAG CAGCGTGACC GGTTCCTGCG CGAGAACCTC GACGCGATGG CGCAGAAGGT CGGCGAAATG CAGGCCAAGG TCGTCAAGCT CGAGGCGATG GGCGAGCGTG TTGCCGGCCT GGCGGGCATC AAGCCCGAGG AGCTGCGGGT TGTGGAGACG CTCGGCGAGA AGCCCCTGGG GGGCGGCGAA GCCGCCACGG TCGAAGGTGG TCGTGGCGGG CCCTATGTGC CGGTGTCGTC GCCCTCGATG GTGCAGCTCA ACTCGGTGGT CGACGCGCTC GAGCTTCAGG CCGCGCGCAG CGGCGACGTG TTCACCCTGA CCGAATCGCG ACTGCTCGAG CGCCGGCTCG AGATGATGAT GGTGCCCAGC GCGCCGCCGG TCCGCGGCCC GATCGGTTCG GGCTTCGGCT TCCGCCTCGA TCCGTTCACG CGGCATGCCG CGCTGCACAC CGGTCTTGAT TTTCCGGCCC CGCAGGGAAC GCCGATCCAC GCTGCGGCAG GTGGCGTCGT GCTCAATGCC GAATCCCAGG GCGCTTATGG CCAGGCCGTC GAGATCGACC ACGGCAATGG CCTGGTCACC CGTTATGCCC ACACATCGAA GTTCCATGTC CGCCCCGGTG AAGTGGTGCG GCGTGGCCAG TTGATCGCCA ATGTCGGCAA CACCGGGCGC TCGACCGGGG CGCACCTGCA TTTCGAGGTG CTGCTCAACG GCGTGCAGCA GAATCCGGCG CGCTTCCTGG CGCGTGGCGA GGACCTGTCC CTGAAGGAAC AGACCGCAGA AGCGTCGCCC GAGCGCCGCT CCGGCAAGCG CAAGACCCGG TGA
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Protein sequence | MDILITHGGL ARTRSFHVGP LQLGVIVATF VLAMMMMSGT IYHFIFLKAA REGWPVVSHL TGLVVRDETE QRDRFLRENL DAMAQKVGEM QAKVVKLEAM GERVAGLAGI KPEELRVVET LGEKPLGGGE AATVEGGRGG PYVPVSSPSM VQLNSVVDAL ELQAARSGDV FTLTESRLLE RRLEMMMVPS APPVRGPIGS GFGFRLDPFT RHAALHTGLD FPAPQGTPIH AAAGGVVLNA ESQGAYGQAV EIDHGNGLVT RYAHTSKFHV RPGEVVRRGQ LIANVGNTGR STGAHLHFEV LLNGVQQNPA RFLARGEDLS LKEQTAEASP ERRSGKRKTR
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