Gene Lcho_0733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0733 
Symbol 
ID6160670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp781601 
End bp782248 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID641663483 
Productresponse regulator receiver protein 
Protein accessionYP_001789771 
Protein GI171057422 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGAC CCCATTTTGC TCCCGACCCC CTGGATCCCC TGCTCACGAC CCGTGAAGCG 
GCGATGCGGC TGGGTGTCTC CCTGCGCACG GTCCAGCTCT GGGTAGAGGC CGGAACGCTG
CCGGCCGGGC GCACGCCCGG CGGTCATCGC CGCATCCGGC TGTCCGCTGT CGAAGCCCTG
GCGCAACGCA GCGGCCTGCG CGCCGCGGCC CAGTCCTCGC AGTCCCTGCA GCCGGTCATC
ACGCCGCTGG ACGTCCTGCT GGTGGCCGCC AGCGTCGACC AGCTGCAGGT CTGGCAGGAG
GCGCTGATGC CCTTGAACGG CGTGATCGCT GTCAGAGGTG CAAACAACGG TTACACCGGC
TTACTTCAGT TGGGACGAAA AACGCCAGAC CTGCTGATCA CCGATCTCGC CATGCCTGAT
ATCGACGGCT ACGCGATGTT GTTGACCCTG GCCGGCCTGC ACGACTACTC CGCCTTGCGT
GTCCTGGCCA TCACGGCACA CACGCCGCAG CAGATTGCCG AACGGGGCGG CTTGCCCGAG
CGCGTGCGGG TGCTGCATCA GCCGGTGCCG GCGATCGCGG TGCGCACCTG GGTCGAGGGC
GAACTGGCTC GGCTCGGCCG CACCCCTCAC CCCGCCCTGC TGGGCTGA
 
Protein sequence
MSRPHFAPDP LDPLLTTREA AMRLGVSLRT VQLWVEAGTL PAGRTPGGHR RIRLSAVEAL 
AQRSGLRAAA QSSQSLQPVI TPLDVLLVAA SVDQLQVWQE ALMPLNGVIA VRGANNGYTG
LLQLGRKTPD LLITDLAMPD IDGYAMLLTL AGLHDYSALR VLAITAHTPQ QIAERGGLPE
RVRVLHQPVP AIAVRTWVEG ELARLGRTPH PALLG