Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0733 |
Symbol | |
ID | 6160670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 781601 |
End bp | 782248 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641663483 |
Product | response regulator receiver protein |
Protein accession | YP_001789771 |
Protein GI | 171057422 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGAC CCCATTTTGC TCCCGACCCC CTGGATCCCC TGCTCACGAC CCGTGAAGCG GCGATGCGGC TGGGTGTCTC CCTGCGCACG GTCCAGCTCT GGGTAGAGGC CGGAACGCTG CCGGCCGGGC GCACGCCCGG CGGTCATCGC CGCATCCGGC TGTCCGCTGT CGAAGCCCTG GCGCAACGCA GCGGCCTGCG CGCCGCGGCC CAGTCCTCGC AGTCCCTGCA GCCGGTCATC ACGCCGCTGG ACGTCCTGCT GGTGGCCGCC AGCGTCGACC AGCTGCAGGT CTGGCAGGAG GCGCTGATGC CCTTGAACGG CGTGATCGCT GTCAGAGGTG CAAACAACGG TTACACCGGC TTACTTCAGT TGGGACGAAA AACGCCAGAC CTGCTGATCA CCGATCTCGC CATGCCTGAT ATCGACGGCT ACGCGATGTT GTTGACCCTG GCCGGCCTGC ACGACTACTC CGCCTTGCGT GTCCTGGCCA TCACGGCACA CACGCCGCAG CAGATTGCCG AACGGGGCGG CTTGCCCGAG CGCGTGCGGG TGCTGCATCA GCCGGTGCCG GCGATCGCGG TGCGCACCTG GGTCGAGGGC GAACTGGCTC GGCTCGGCCG CACCCCTCAC CCCGCCCTGC TGGGCTGA
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Protein sequence | MSRPHFAPDP LDPLLTTREA AMRLGVSLRT VQLWVEAGTL PAGRTPGGHR RIRLSAVEAL AQRSGLRAAA QSSQSLQPVI TPLDVLLVAA SVDQLQVWQE ALMPLNGVIA VRGANNGYTG LLQLGRKTPD LLITDLAMPD IDGYAMLLTL AGLHDYSALR VLAITAHTPQ QIAERGGLPE RVRVLHQPVP AIAVRTWVEG ELARLGRTPH PALLG
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