Gene Lcho_0721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0721 
Symbol 
ID6162958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp769621 
End bp770133 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content67% 
IMG OID641663473 
Producthypothetical protein 
Protein accessionYP_001789761 
Protein GI171057412 
COG category[S] Function unknown 
COG ID[COG4925] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.209049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGGA CCGCCTTGCG CACATCGTTC GATCTCGGTG GCCGGCGCTG GCGCCATGCG 
GCGGGGCTCG GCTTGGCGGC CGCGCTCGCG ACGGGCACCG TCGGCAGCCT GGCCGCAGAC 
GACCTCCGCC ACACACAAGC TGCCATGGCG TCCCAGGAGA AGACCCACAT GTGGATGACC 
ATCGGCGGCA CGCACCGCTT TGCCGTGACA CTGGAGAACA ACCCGACCGC GCGGGCGTTT 
GCGCAGATGC TCCCGCTGAC GCTCGACATG CCCGACCTGA ACGACAACGA GAAGCACGTG 
CGCTTGCCGC ACAGCTTGCC GACCCACGCG CAACGGCCGG GAACGATCCG AACCGGTGAC 
GTGATGCTTT ACGGCAGCGA CACCTTGGTG GTGTTCTACA AGACCTTTCC GTCGAGCTAC 
AGCTACACGC GAATCGGGCG CGTCACCCCG GTGGATGGGC TCGTGCAGGC ATTGGGGACG 
GGCAGCCAGC GCATCGGCTT CGCTCTGGAC TGA
 
Protein sequence
MKGTALRTSF DLGGRRWRHA AGLGLAAALA TGTVGSLAAD DLRHTQAAMA SQEKTHMWMT 
IGGTHRFAVT LENNPTARAF AQMLPLTLDM PDLNDNEKHV RLPHSLPTHA QRPGTIRTGD 
VMLYGSDTLV VFYKTFPSSY SYTRIGRVTP VDGLVQALGT GSQRIGFALD