| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0666 |
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| Symbol | |
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| ID | 6163900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 720530 |
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| End bp | 721684 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663417 |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_001789706 |
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| Protein GI | 171057357 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTGT ACTTCTCCTT CGGGCCGATG TTGCGGTTCT TGCGTGTGCT GCATCAGTGG
CAATGGTCGT GGCCTGTCGT CTGGCCATGG CTGGCCGTGG TGGTGCTGTC GCTGGTTTCG
GCGGTGTGGA CGCCCGCCTC GGCCGCTTCG CTGGGCATCG GTGTCGACCG CGGCGCCGAT
GACCGCGAGG CCATCGGCCG CGCGCTGCAG CGTGCCAGCG ATGCCTCGAT CGGACTGGTC
GTCCGCGCCG TCGAAGGCGC TTCATCGGCC GAGACGCTGG GTGACGTCCG CAAGGGTTCG
GGCGTGGTCA TCAGCGCCGA CGGCGTCGTG CTGACCATCG GCTACCTGAT CCTCGAGGCC
GAACAGATCG ACCTGGTGCT CGACGACGGC CGCCTGGTGC CGGCGCGCGC GCTGGCCTAC
GACCTTGCCA CCGGCTTCGG ACTGGTGCAG GCGCTGGTGC CGCTGCCGGT TCCGTCGGTG
CCGCTGGGCG ATTCGGCCCA GGTCGGCGCC GACGAGACGC TGATGTTCGT CAGCGGCGGT
CAGGGTGGCG CGGTGAGCCC GGCGCGTCTG CTGGCGCGCA GCCGGTTTGC CGGCTATTGG
GAATACCTGA TCGACGGCGC CCTGTTCACG GCCCCGGCGC GGCGCGATCA CAGCGGTGCG
GGCCTGTACA ACCGCCGCGG CGAACTGGTC GGCATCGGTT CGCTGGCGCT GCCCGATGCC
CGTGCCAGCG TGCGTCAACC GGGCGCCTGG CTGCATCCGG TCGATGACGA GGTGGGCCGG
ATCCCCGGCA ACATGTTCGT GCCGATCGAT CTGCTCAAGC CGATCCTGGG TGAATTGCGC
AGCCAGGGCC GTTCCCAGGC CAGCCGCCGG GCGTGGCTGG GGCTGAACTG CAGCGAGGCC
GATGGCCGCG TCACGGTGTT GCGGGTCAGT CGCGACAGCC CGGCGCAGGC GGCCGGCCTG
GAGCCGGGCG ACCGCATCCT GCGGCTCGAC GGCGTGGCGA TCGACGACCT GGCGGGCTTC
TACCAGCACC TCTGGGAGGA CGGCGACCCC GAGCGCGAGA TCCACCTCGA GATCACGCGC
GCCGGCCAGC CGCGCGATCT GCTGCTGCGT GCCGTCGATC GGTCCGTCAC GCTCAAGCGC
GCCCGCGGCA TCTGA
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| Protein sequence | MRLYFSFGPM LRFLRVLHQW QWSWPVVWPW LAVVVLSLVS AVWTPASAAS LGIGVDRGAD
DREAIGRALQ RASDASIGLV VRAVEGASSA ETLGDVRKGS GVVISADGVV LTIGYLILEA
EQIDLVLDDG RLVPARALAY DLATGFGLVQ ALVPLPVPSV PLGDSAQVGA DETLMFVSGG
QGGAVSPARL LARSRFAGYW EYLIDGALFT APARRDHSGA GLYNRRGELV GIGSLALPDA
RASVRQPGAW LHPVDDEVGR IPGNMFVPID LLKPILGELR SQGRSQASRR AWLGLNCSEA
DGRVTVLRVS RDSPAQAAGL EPGDRILRLD GVAIDDLAGF YQHLWEDGDP EREIHLEITR
AGQPRDLLLR AVDRSVTLKR ARGI
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