| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0604 |
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| Symbol | |
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| ID | 6159882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 654548 |
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| End bp | 655195 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641663354 |
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| Product | anti sigma-E protein, RseA |
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| Protein accession | YP_001789644 |
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| Protein GI | 171057295 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3073] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000000998375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGAGT CGGATCGAGC CGAGGACAGC ACCGCACAGC GGATCTCGGC CCTGGTGGAC
GGCGAACTGG CCGCCGCGGA GGTGGCCGAC ACCTGCCGCG CCTGGCGCAC GGATGCGCGG
CTGCGCGCCG ACTGGCACGC CTACAGCCTG ATCGGCGACG TGCTGCGCTC CACCGATCTG
GCCCATCCGC CGGCGCGCGA CCAGGCATTC CTGGGTGCGC TGCGCGAGCG GCTGGCGCTC
GAACCGGTCG TGCTGGCGCC CGCCCGCCCC GAGCCGCCGC AGCAGGCCCC TGCCGCAGCG
GTCGTCAATG GCAGGCCGGC ATCCGTCACG CCCTTGCGTG CGCGGCGACC GCGCTGGGTG
ACACCCGTGG GCATTGCGGC CGGTGTCGCG ATGGTCGCCG GTCTGGCCTG GACGATGCGC
CCGCCCGCCA CCGAGCCCCT GCAGCAGATG GCACGGATGG CGCTGCCGCC ACCGTCACAG
CCCGTCGAAC CGGCCGCGCG GGCCGAGGCC GTGGCGGTGC TGGCGCCCGA CACCCGCGAG
CAGCTCGAGC CCTACCTGAA CGCGCACCGC ATGGTGCCGG CCAAGGCCGC GTTCGGCCCG
GCGCCGGGTT TCATGCGCAG CGTGGCCCAC GAGCCGGGAT CTCGATGA
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| Protein sequence | MSESDRAEDS TAQRISALVD GELAAAEVAD TCRAWRTDAR LRADWHAYSL IGDVLRSTDL
AHPPARDQAF LGALRERLAL EPVVLAPARP EPPQQAPAAA VVNGRPASVT PLRARRPRWV
TPVGIAAGVA MVAGLAWTMR PPATEPLQQM ARMALPPPSQ PVEPAARAEA VAVLAPDTRE
QLEPYLNAHR MVPAKAAFGP APGFMRSVAH EPGSR
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