| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0566 |
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| Symbol | |
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| ID | 6162658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 615808 |
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| End bp | 616965 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663315 |
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| Product | saccharopine dehydrogenase |
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| Protein accession | YP_001789606 |
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| Protein GI | 171057257 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.411174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGT CCGGACTTCG CAAGGTGCTG GTGCTGGGCG CCGGCAAGGT CGGCAGCACG
ATCGCCGACA TGCTGATCGA TGCCTCGGGG CCGGATCAGG GCCTCGCCGT GACGCTGGCC
GACCGGCTCG ATCCCGCCGT GGCGCCTGAC GACGCGCCGA TCAAGCCCAT CCACCTCGAC
GTCGAGGACA GCTACGCCCT GACCGCTGCG CTGCGCGCGC ACCAGGTCGT CATCAACGCG
CTGCCGTTCT ACCTGGCCAC GCGGGTCGCC CTGGCCGCCG CGCAGGCGCA GGTGCACTAC
TTCGACCTGA CCGAAGACAT CGCCGCCACC ACCACCATCC GCCAGATCGC CGCCACGGCG
CCCTCGCTGC TGATGCCGCA ATGCGGCCTG GCGCCGGGTG TGATCGGCAT GCTCGGCGGC
CACCTCGCGG CGCGTTTCGA CGAGCTCTAC GACCTGCGCC TGCGCGTGGG CGCGCTCACG
CGCAACGCCA CCAACAGCCT GCGCTACAAC TTCACCTGGA GCATCGACGG CGTCATCAAC
GAATACTGCA ACCCCTGCCA GGCCATCGTG CACGGCGAGC TGACCACCGT GCAGCCGCTC
GAAGGCCACG AGACCTTCAC GCTCGACGCC GAGGCCTTCG AGGCCTTCAA CACCTCGGGC
GGACTGGGCA CGCTGTGCGA GACGCTGCGC GGGCGGGTGC GCAACCTCGA CTACAAGACC
ATCCGCTACC CCGGCCACCG CGACGCGATG GCCTTCCTGC TGCACGACCT GCGCCTGATC
GAGCGGCGCG ACCTGCTGCG CCAGGTGCTC GAACACGCCG TGCCGCACAG CCGCGAGGAC
GTCGTCATCG TGTTCGCCTC CGCCGCCGGC CGCCGCCAGG GCCGCTTCGA GCAGGAGACC
CGGCTGGCGC GCATCTTCGG CGCGCCGCTG CGCGGCGTCG ATCGCACCGC CATCGAGCTG
AGCACCGCCG CCGGCGTGGT CGGCCTGTTC GAGCTGCTGC GCGCGGGCAA GCTGCCGCGT
GCGGGTTTTG TCGGCCAGGA ACAGGTCGGG CTGGGCGATT TCCTGCACAC CCGCGTCGGC
CACTACTACG CCGCTCTCGC CGACCCCGGC AGCCGCGCGG CCAACGACCC GATCGGTTTC
ACGCCCGTGC AAGCGTGA
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| Protein sequence | MDTSGLRKVL VLGAGKVGST IADMLIDASG PDQGLAVTLA DRLDPAVAPD DAPIKPIHLD
VEDSYALTAA LRAHQVVINA LPFYLATRVA LAAAQAQVHY FDLTEDIAAT TTIRQIAATA
PSLLMPQCGL APGVIGMLGG HLAARFDELY DLRLRVGALT RNATNSLRYN FTWSIDGVIN
EYCNPCQAIV HGELTTVQPL EGHETFTLDA EAFEAFNTSG GLGTLCETLR GRVRNLDYKT
IRYPGHRDAM AFLLHDLRLI ERRDLLRQVL EHAVPHSRED VVIVFASAAG RRQGRFEQET
RLARIFGAPL RGVDRTAIEL STAAGVVGLF ELLRAGKLPR AGFVGQEQVG LGDFLHTRVG
HYYAALADPG SRAANDPIGF TPVQA
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