Gene Lcho_0554 details

Gene Information

• Locus tag: Lcho_0554
• ID: 6164129
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 601622
• End bp: 602323
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 641663303
• Product: GCN5-related N-acetyltransferase
• Protein accession: YP_001789594
• Protein GI: 171057245

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 40
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGTTGT CCCCCACTCC CTCGTCCACC GGTTCAGCGG TCAACCCTCG TCCGCGCTCG 
CGGGTGTGGC GCTGGCTGCC GATCCGGCGC CTGTCGCAGC GCCACCGCAT GCGGGTGCTG 
CGCCACCTGC TGAGCCTGAG CGAGCGTGAT CGTTACCTGC GCTTCGGCTA TCCGGCGAGC 
GACGAGCGGA TCGAGAAATA CGTCGAGACG CTGGATTTCC AGCGCAGCGA GCTGTTCGGC 
ATCTTCGATC GGCGGCTCGA GCTGGTGGCG ATCTCGCAGC TGGCCTATGC CGAGCCGGTC 
GAGGGCGACA CCAACGGGGC GATGGTCGAG TTCGCGGTGT CGGTGCGCAG CCATGCGCGC 
GGACGCGGCT ACGGCGACCG CCTGTTCAGC CATGCGCTGC GCCATGCACG CAACCGCTCG 
ATCGATCGCC TGATGATCCA CGCGCTGAGC GAGAACACCG CCATGCTGCG CATCGCCCGC 
AAGGCCGGCG CCGAGGTCCG GCGCGAGGGC AGCGAATCGG AAGCCTGGCT GCAACTGCCG 
CCGCACAGCC TGGCGTCGCG CGTGGAAGAG CTGGTGGCGG ACCGGGTCTC GGCGCTCAAC 
TACCGGGTCA AGCTGCACGC CCGCCAGGTG GGCTGGGTGC TGGCCGTCGT CAACGAGATC 
AAGCATCAGA TATCGCGCCG GCGCCACGTC GCTTCCCAAT AG 

 

Protein sequence

MKLSPTPSST GSAVNPRPRS RVWRWLPIRR LSQRHRMRVL RHLLSLSERD RYLRFGYPAS 
DERIEKYVET LDFQRSELFG IFDRRLELVA ISQLAYAEPV EGDTNGAMVE FAVSVRSHAR 
GRGYGDRLFS HALRHARNRS IDRLMIHALS ENTAMLRIAR KAGAEVRREG SESEAWLQLP 
PHSLASRVEE LVADRVSALN YRVKLHARQV GWVLAVVNEI KHQISRRRHV ASQ