Gene Lcho_0553 details

Gene Information

• Locus tag: Lcho_0553
• ID: 6164128
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 600561
• End bp: 601370
• Gene Length: 810 bp
• Protein Length: 269 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641663302
• Product: hypothetical protein
• Protein accession: YP_001789593
• Protein GI: 171057244

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 42
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCGAACA ACGTTTGGAT CATTGCAGTC GTCGCGATCA TCGCCATGCT GAGCCTGGCG 
CTGCTCGCGT TGCAGCGGTC CCGGCAAGCC AGCCCGGTGC GCGACGAGCT GCCCACCGAG 
TGGCCGCTGG CGCAACGGCC GATCTTCTCG CCCGAAGAAC GTGCGCTCTA TCGGCAGCTG 
CGCGCCGCCT TGCCGCATCA CACGGTGCTG GCCAAGCTGC CGCTGGTGCG CTTCTGCCAG 
CCGCAGGATC GCAACGAGCT GCGCTACTGG TTCAACCTGC TGGGCCCGCT GCACGTCAGC 
TTCGTGGTCT GCGCCGACAA CGGCCGCGTG CTCGCCGCCA TCGACATCGA ACGGCCGTCG 
CGGCCGGCCT CCAAGCGCGC CGCCACCATC AAGCAGTCGG TGCTCGAAGC CTGCCGCGTG 
CGCTACGTCA AGTGCCGCAC CGACCAGCTG CCGTCGGCCG CCGAGCTGCA GATGCTGGTG 
CCGCACCAGT CGGAATCGAG CCGACCGATG GTGCCCGGCA CCTTGCGCGA CAGCCAGGAG 
CGCCGCTCGA CGCTGGCGCA TGCGATGCGC GGCCGGTCGG CCGACAGCCA GACCCAGTGG 
TACGAATCGG GTTTTGCGCA GGACTCGTTC TTCGCCCCCG AAACCCAACG CGACCCGTTC 
GCCGACGATG GCCCGGCCGC CACCGGTGCC ACGCAGCGCC CGGCGCCACG GCCCAGCTCG 
TCGTGGGCCG GCGGTCGCGG CCCGATCCGC CGCAGCGAAG ACTTCGGCCC GAGCGGCGAC 
GCCGCCGGCC ACATCATCGG CCGGGTCTGA 

 

Protein sequence

MPNNVWIIAV VAIIAMLSLA LLALQRSRQA SPVRDELPTE WPLAQRPIFS PEERALYRQL 
RAALPHHTVL AKLPLVRFCQ PQDRNELRYW FNLLGPLHVS FVVCADNGRV LAAIDIERPS 
RPASKRAATI KQSVLEACRV RYVKCRTDQL PSAAELQMLV PHQSESSRPM VPGTLRDSQE 
RRSTLAHAMR GRSADSQTQW YESGFAQDSF FAPETQRDPF ADDGPAATGA TQRPAPRPSS 
SWAGGRGPIR RSEDFGPSGD AAGHIIGRV