Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0553 |
Symbol | |
ID | 6164128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 600561 |
End bp | 601370 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641663302 |
Product | hypothetical protein |
Protein accession | YP_001789593 |
Protein GI | 171057244 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAACA ACGTTTGGAT CATTGCAGTC GTCGCGATCA TCGCCATGCT GAGCCTGGCG CTGCTCGCGT TGCAGCGGTC CCGGCAAGCC AGCCCGGTGC GCGACGAGCT GCCCACCGAG TGGCCGCTGG CGCAACGGCC GATCTTCTCG CCCGAAGAAC GTGCGCTCTA TCGGCAGCTG CGCGCCGCCT TGCCGCATCA CACGGTGCTG GCCAAGCTGC CGCTGGTGCG CTTCTGCCAG CCGCAGGATC GCAACGAGCT GCGCTACTGG TTCAACCTGC TGGGCCCGCT GCACGTCAGC TTCGTGGTCT GCGCCGACAA CGGCCGCGTG CTCGCCGCCA TCGACATCGA ACGGCCGTCG CGGCCGGCCT CCAAGCGCGC CGCCACCATC AAGCAGTCGG TGCTCGAAGC CTGCCGCGTG CGCTACGTCA AGTGCCGCAC CGACCAGCTG CCGTCGGCCG CCGAGCTGCA GATGCTGGTG CCGCACCAGT CGGAATCGAG CCGACCGATG GTGCCCGGCA CCTTGCGCGA CAGCCAGGAG CGCCGCTCGA CGCTGGCGCA TGCGATGCGC GGCCGGTCGG CCGACAGCCA GACCCAGTGG TACGAATCGG GTTTTGCGCA GGACTCGTTC TTCGCCCCCG AAACCCAACG CGACCCGTTC GCCGACGATG GCCCGGCCGC CACCGGTGCC ACGCAGCGCC CGGCGCCACG GCCCAGCTCG TCGTGGGCCG GCGGTCGCGG CCCGATCCGC CGCAGCGAAG ACTTCGGCCC GAGCGGCGAC GCCGCCGGCC ACATCATCGG CCGGGTCTGA
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Protein sequence | MPNNVWIIAV VAIIAMLSLA LLALQRSRQA SPVRDELPTE WPLAQRPIFS PEERALYRQL RAALPHHTVL AKLPLVRFCQ PQDRNELRYW FNLLGPLHVS FVVCADNGRV LAAIDIERPS RPASKRAATI KQSVLEACRV RYVKCRTDQL PSAAELQMLV PHQSESSRPM VPGTLRDSQE RRSTLAHAMR GRSADSQTQW YESGFAQDSF FAPETQRDPF ADDGPAATGA TQRPAPRPSS SWAGGRGPIR RSEDFGPSGD AAGHIIGRV
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