| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0498 |
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| Symbol | |
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| ID | 6161820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 539365 |
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| End bp | 540036 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663247 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001789538 |
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| Protein GI | 171057189 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00313695 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCATCC TGATCGCCGA AGATGACCAG GTCCTGGCCG ATGGTTTGCT GCGCAGCCTG
CGCAGCGCCG GTTATGCGGT CGACCATGTC GGTTCCGGTT CGGAGGCCGA CGCGGCGCTG
GCCGCCCACG AGTTCGACAT GCTGATCCTG GACCTGGGCC TGCCCAAGCT GCACGGCCTG
GAGGTGCTCA AGAAACTGCG CGGGCGCGGC TCGTCGGTGC CGGTGCTGAT CCTGACCGCC
GCCGACAGCA TCGAGCAGCG CGTCAAGGGC CTCGATTTCG GCGCCGACGA CTACATGGCC
AAGCCGTTCT CGCTGCAGGA GCTCGAGGCG CGCGTGCGTG CGCTGACGCG CCGCGGCCTC
GGTTCGGCCA GCGCGATCAT CCGCCACGGC CCGCTGAGCT TCGACGCCAC CGGCCGGGTG
GCCTACATCA ACGACCTGAT GATCGACCTG TCGGCGCGCG AGCTGAGCCT GCTCGAGGTG
CTGCTGCAGC GCGCCGGCCG GCTGGTCAGC AAGGACCAGC TGGTCGAGCG TCTGTGCGAG
TGGGGCGAAG AGGTCAGCAA CAACGCGATC GAGGTCTACA TCCACCGTCT GCGCAAGAAG
ATCGAACAGG GACCGATCCG CATCGCCACC GTGCGCGGCC TCGGCTATTG CCTTGAAAAG
ATCCCGGGCT GA
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| Protein sequence | MRILIAEDDQ VLADGLLRSL RSAGYAVDHV GSGSEADAAL AAHEFDMLIL DLGLPKLHGL
EVLKKLRGRG SSVPVLILTA ADSIEQRVKG LDFGADDYMA KPFSLQELEA RVRALTRRGL
GSASAIIRHG PLSFDATGRV AYINDLMIDL SARELSLLEV LLQRAGRLVS KDQLVERLCE
WGEEVSNNAI EVYIHRLRKK IEQGPIRIAT VRGLGYCLEK IPG
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