Gene Lcho_0484 details

Gene Information

• Locus tag: Lcho_0484
• ID: 6162090
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 522307
• End bp: 524430
• Gene Length: 2124 bp
• Protein Length: 707 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 641663233
• Product: FkbM family methyltransferase
• Protein accession: YP_001789524
• Protein GI: 171057175
• TIGRFAM ID: [TIGR01444] methyltransferase, FkbM family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTGATCA CCGCCCACTA CGCACAGCTC AACGCCCAGT TGCATGCCGA TCGCCCCGAC 
TACGGCACCA GCGGACAGCG CTGGGCACCG GTGGTCGCCG CACTGGCCGA TCGGGTCAAG 
GCCGGCGACA TCCTCGACTA CGGCTGCGGC AAGCAGACCC TGGCCGCGGC ACTGGCGGCA 
CGCCAGGTGC GAGGTTATGA CCCGGCCATT CCCGAGTTGA GCGCAGAGCC GAAACCTGCC 
GACGTGGTGG TCTGCACCGA CGTGCTCGAA CATGTCGAGC CCGACTGCAT CGACGACGTG 
CTGGACGACC TGTGCCGGGT GACGCAGAAG GCCGCACTGA TCACGGTGGC CACACGCCCG 
GCCGTCAAGA AACTGGCTGA CGGCCGCAAC GCCCACCTGA CGATTCAACC GTTTTCATGG 
TGGCGCGAGC ACTTCCTGTC GCGTTTCGAC ATCGTCGATG TGCGCGAAGA AGAAGGCAAC 
GAGTTCACCC TGATCCTGAA GGCGCTACAT GCCGAGGATC TCGACCTGTC AGGCTTCCGC 
CTGCCCCAGC CCGCAAACCC GTCCAAACCG GCAAAGACAG CCACCCCGGA CGCGGCCGCC 
ACGGTCACCA GCATCCTGGT CGACGACAAG CGCCTGAAGT TCCACACGCC CAACCGCATG 
ACGCAGTGGC GTGTCGAAAG CCTCTTCACC AAGGAACCCG ACACCATCGC CTGGCTCAAG 
CAGATGAAGA GCGGCGAGGT ACTGGTCGAT GTCGGCGCCA ACGTGGGCAT GTACTCGGTG 
TTCGGCGCGG TCTGCCGCGG CGTGCAGGTG CATGCCTTCG AACCCGAGTC GCAGAACTAC 
GCCCTGCTCA ACAGCAACAT CGCCTTGAAT GGGTTGTCGG GCCGGGTGGT GGCTTACCCG 
CTCGCGTTGT CGGACACCAG TGGCGCCGAC AAGCTGTACC TGTCGGACTT CAGCCCGGGC 
GGCTCGTGCC ACTCGTTTGG CGAGCAGGTC GGCTTCGATC TCAAGCCGCG CGGCTCGGCC 
TTTGCCCAGG GCGCATTCAG CGTCACGCTC GACCAGCTGG TGAGCGCCGG ATCGGTGCCC 
GTTCCGGACC ACATCAAGCT CGACGTCGAC GGCTTCGAGC ACAAGGTGAT CGCGGGGGCA 
CTCACCACCT TGCGCGATCC GAAGGTCAAG ACCGTCCTGG TCGAACTCAA CACCCATCTG 
GACGAACACC GGCAGGTGAT CCAGACCTTG CATGAACTCG GCTTCAGCCA TGACCCGCAG 
CAGGCCCAGG GCGCTCTGCG GGCGTCGGGG GCCTTCGAGG GCGTCGGCGA GTTCATCTTC 
ACGCGCCAGC TTGAAAAGAA GGTCGAACTG ATCCAGCGCA CCACGCTCAG GCTGCCGATG 
TCGAGCCGGG CCCGAGACGT GTTGCACCAC GTGCTGGAGC GGGTTGCGCA GGCGCCGGTC 
ACCGACGCGC CGTTCCCGCA TGCGGTGATC GACGACGTGT TCCCGCCCGA CTACTACGCC 
GAGATGCTGC GCCAGTTCCC GGCCTTGTCG AGCATGCGGC CGCTGAGCGA AACCGGACGT 
GTCGGCAAGG ACAACTACAA GGAGCGCATG ACCACGCTCT TTGAAGAAAG CGACTTCGCC 
CGTCTGAGCC AGGAGCAGGC GCGCTTCTGG CGCGAACTCG CGGACTGGAT GTACAGCGAC 
ACATTCCTGC AAGCGTTTGT CGAGAAGTTC CACCAAGCAC TGGAACCACG CATCGCCGCC 
GTGCAGCGGG CCGAAGGCCA ACTCAACGTG CGTGGCGATG CGCTGCTGGT CAACGACCAG 
ACCCGCTACG CCATCGGACC GCACACCGAT GCGCCACATC GGCTGGTGAC GTTCCTCTTC 
TATCTGCCGT CGGACACCTC CATGCAGGAA CTGGGCACGT CGCTCTACCG GCCCAAACAA 
GCCGACTTCA CCTGCTGGGG CGGCCCTCAC TATCCACACG CGAAATTCGA TCAGGTCGGA 
CGGGTCGATT TCCTGCCCAA CCGGCTGCTC GCCTTTCCGA AGACGGAGCG GTCATTTCAC 
GGCGTCGAGC CGATCGATCG TGCCGACGTC AACCGGCGAC TGCTGATCAA CAACATCCGG 
CTCACGAACC GGGTGATGTA CTGA 

 

Protein sequence

MLITAHYAQL NAQLHADRPD YGTSGQRWAP VVAALADRVK AGDILDYGCG KQTLAAALAA 
RQVRGYDPAI PELSAEPKPA DVVVCTDVLE HVEPDCIDDV LDDLCRVTQK AALITVATRP 
AVKKLADGRN AHLTIQPFSW WREHFLSRFD IVDVREEEGN EFTLILKALH AEDLDLSGFR 
LPQPANPSKP AKTATPDAAA TVTSILVDDK RLKFHTPNRM TQWRVESLFT KEPDTIAWLK 
QMKSGEVLVD VGANVGMYSV FGAVCRGVQV HAFEPESQNY ALLNSNIALN GLSGRVVAYP 
LALSDTSGAD KLYLSDFSPG GSCHSFGEQV GFDLKPRGSA FAQGAFSVTL DQLVSAGSVP 
VPDHIKLDVD GFEHKVIAGA LTTLRDPKVK TVLVELNTHL DEHRQVIQTL HELGFSHDPQ 
QAQGALRASG AFEGVGEFIF TRQLEKKVEL IQRTTLRLPM SSRARDVLHH VLERVAQAPV 
TDAPFPHAVI DDVFPPDYYA EMLRQFPALS SMRPLSETGR VGKDNYKERM TTLFEESDFA 
RLSQEQARFW RELADWMYSD TFLQAFVEKF HQALEPRIAA VQRAEGQLNV RGDALLVNDQ 
TRYAIGPHTD APHRLVTFLF YLPSDTSMQE LGTSLYRPKQ ADFTCWGGPH YPHAKFDQVG 
RVDFLPNRLL AFPKTERSFH GVEPIDRADV NRRLLINNIR LTNRVMY