Gene Lcho_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0467 
Symbol 
ID6160926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp507318 
End bp507866 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content67% 
IMG OID641663216 
Productputative lipoprotein 
Protein accessionYP_001789507 
Protein GI171057158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGC TGCGCTCGAT CCGACGCCTG GGCCTGCTGT TCGCGCTGTG CACGCCGCTG 
TGGCTGGCCG GCTGTGCCTC GCCGCAACCG CAGGACTACG CCGATCAGAC CCCCAAGCTC 
GACCTGCGCG AGTACTTCAA CGGCGACCTG ACCGCGCACG GCCTGTTCAC CGACCGCTCG 
GGCGCCGTCA AGCGCCGCTT CACGGTCAAG ATGAAAGGCA CGTGGCAGGG CGACCAGGGC 
GTGCTCGAAG AAGACTTTCT CTACAGCGAC GGCCAGACCG AGCGGCGCGT CTGGCGCCTC 
ACGCGCGGCG CCGACGGCCG CTACACCGGC CAGGCCGACG ACGTGATCGG CACCGCACAG 
GGCCAGGCCG CCGGCAACGC GCTGCGCTGG CAGTACACGC TGCGGCTGAA GGTCGACGAC 
AGCACCTACG ATGTGAAATT CGACGACTGG ATGTTCCTGA TGGACCGCCA GGTGATGCTC 
AACCGGGCGG CGATGAGCAA GTTCGGTTTC CACCTCGGCG ACGTCACCCT GTCGTTCCAC 
AAACCCTGA
 
Protein sequence
MNPLRSIRRL GLLFALCTPL WLAGCASPQP QDYADQTPKL DLREYFNGDL TAHGLFTDRS 
GAVKRRFTVK MKGTWQGDQG VLEEDFLYSD GQTERRVWRL TRGADGRYTG QADDVIGTAQ 
GQAAGNALRW QYTLRLKVDD STYDVKFDDW MFLMDRQVML NRAAMSKFGF HLGDVTLSFH 
KP