| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0439 |
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| Symbol | |
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| ID | 6164115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 480015 |
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| End bp | 480971 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663188 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001789479 |
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| Protein GI | 171057130 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACC TCGACCTCAA ATCGCTGCGC CTGCTGGTGG CGGTGTGCGA CTGCCAGAAC
ATCAAGCTGG CGGCGCAGCA GGAACACATC GAACCCTCGG CGATCAGCAA GCGCATCGCC
CAGCTCGAGG CCACGCTCGG CACGCCGCTG CTGGTGCGCG GGCGGCGCGG CGTGCTGCCC
ACGCCGGCCG GGCTGGCGCT GCTCGAACAC GCGCGCACGT TGCTCGACAC GCTCGAGCGC
ATCGAGACCG ACGTGGCGGC CTACGCCGGC GGCCTGCGCG GCCACGTGCG GCTGGTGGCC
AGCGTGTCGG CGATCGCCGA GTCGCTGCTC GACGACGTCG CGCTGTTCAT GCGCGACCCC
GACAACCGCG GCATCCGGAT CGACATCGAG GAGCGCCTGT CGACCGACGT GGTGCGGCTG
GTGCGCGACG GCCGCGCCTC GATCGGCGTG TGCTGGGACA GCGTCGACCT GGCCGGCCTG
TCGCACGTCG GCTACCGCCG CGACCAGCTG GTGCTGGCGG TGCACCCCGA GCACGAGCTG
GCGTCGCGCC GCTCGCTGCG CTTCGAGCAG ACGCTGGCGC ACGAACACGT CGGCCTGCCG
CCGACGACGG CGGTGTATTC GATGCTGCAC CGCGCCGCCG CGCGGGCCGG GCGCACGCTG
GTCAACCGCG TGGTGGTGTC CAACTTCGAC GCCGCGCTGC GGGTGGTGCG CGCCAACCTG
GGGCTCAGCG TGATCCCGAT GCAGGTCAGC CGGTCGTGGG CGGCGTCCGG CGAGATCGTC
GCCATCCCGC TGCTCGACGG CTGGGCGCAG CGGCGCTTCG CGGTGTGTTT CCGCGAGCGC
GGCGCGCTGA CGCCGGCGGC GGCGCGGCTG GTCGATTTCC TGGTCGGCCG GGCCGAGGCG
GCAGAGGCTG CCGATGGTGT TGAACCGGCT GAACCGGCCG GCGGCCCCGC CGCCTGA
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| Protein sequence | MRDLDLKSLR LLVAVCDCQN IKLAAQQEHI EPSAISKRIA QLEATLGTPL LVRGRRGVLP
TPAGLALLEH ARTLLDTLER IETDVAAYAG GLRGHVRLVA SVSAIAESLL DDVALFMRDP
DNRGIRIDIE ERLSTDVVRL VRDGRASIGV CWDSVDLAGL SHVGYRRDQL VLAVHPEHEL
ASRRSLRFEQ TLAHEHVGLP PTTAVYSMLH RAAARAGRTL VNRVVVSNFD AALRVVRANL
GLSVIPMQVS RSWAASGEIV AIPLLDGWAQ RRFAVCFRER GALTPAAARL VDFLVGRAEA
AEAADGVEPA EPAGGPAA
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