| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0411 |
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| Symbol | |
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| ID | 6161060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 449455 |
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| End bp | 451221 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663160 |
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| Product | dihydroxyacetone kinase |
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| Protein accession | YP_001789451 |
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| Protein GI | 171057102 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2376] Dihydroxyacetone kinase |
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| TIGRFAM ID | [TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGA ACCGCGTCAT CAACAACCCC GACCTGGTGG TCGAGGACAT GCTCACCGGC
TGGCTGGCCG CTCACGCCGC CACCGTCTGC GCCACTGCCG AGAACCCGCG CGTGGTCAAG
CGGGTGCAAT CGCCCGAGGC CGGCAAGGTG GGGGTGGTGA CGGGTGGCGG CTCGGGCCAC
GAGCCGGCGT TCCTGGGTTA CGTGGGCGAC GGCATGGTCG ACGCGGTGGC GATCGGCGAG
ATCTTCTCGT CGCCCACCGC CAAGAGCTTT CTCGACGCGA TGCGCGCGGC CGACGGCGGC
GCGGGCGTGG CCTGCCTGTA CGGCAACTAC GCCGGCGACA ACATGAACGT GAAGATGGCC
ATCCAGATGG CCGAGCGCGA GGGCATCGTG GTGCGCACCG TGGTCGCCAA CGACGACGTG
CCGTCCGCGC CCAAGGGCGA CGAGGCCAAG CGCCGCGGCG TGGCCGGCGA GATCGTGATG
TGGAAGGTCG GCGCGGCCAA GGCGGCGATG GGCGGCAGCC TGGACGAGGT GATCGCCGCC
GCGCAGAAGG CGATCGACCA CACCCGCAGC ATCGGCATCG GCCTGTCGGC CTGCGTGATT
CCGGCGGTGG GCCACGCCAA CTTCACGATC GAACACGGCA CGATGGAAGT CGGCATCGGC
CACCACGGCG AGCCCGGCAT CGACGTGCGC GCCACCGCCA GCGCGGCCGA GATGGCCGAG
ATGATGCTCA ACGTCGTGCT GCCGGATCTG CCGTTCGGCG CCGGCGACCG TGTCGCGGTG
CTGGTGTCGG GCCTGGGCGC CACGCCGCTG ATGGAGCAGT ACATCCTGTA CGGCGAGATC
CGCAAGCGCC TGGCCGCACA AGGCATCACG GTGGCCTTCA ACCAGGTCGG CAACCTGTTC
ACCTCGCTCG AGATGATGGG CGTGACGCTG ACGCTGATGA AGCTCGATGA CGAGCTCGAA
GCCTGCCTCG CGCACCCGTG CAGCTGCGTC GGCCTGACGG TGGCCGGTGA TGCGAGTCAG
GCCTCAGCCG GCCGCGCCTA CAGCGGCTCG GCCACCGCGA AATCGACCGG GCCGGTGGCC
GCACGCGCCG CCGCCGTGGC ACGCACCGCC GTCGGCCCGG CGCTGGCGCT GAACGGCGCC
GGCGGGCTGG TGCGCGACCT GATCGACACC ATCGTCGCCA ACCGCCAGTA CCTCAGCGAC
ATCGACGGCC TGATCGGCGA CGGCGATCAC GGCATCAACA TGGCCAAGGG CTTCACCGGC
TGCGGCACGC GGCTCGATGC GCTGGGCGAC GCGGCGCAGT CGCTGCCTGC GGCGCTGGAG
CAGCTGTCGA AGGCGCTGAT GGACGACATC GGCGGCTCGA TGGGCCCGCT CTACGGCAAC
TTCTTCCTCG GCTTCGTCAA CACGCTGGAG CCGCACGCGA TGCTCGATGC GGCGCTGTTC
GGCGATGCCT TGGCCGCGGC CGTGGCCAAC GTGCAGGCGA TGGGCAACGC CCAGGTCGGC
GACAAGACGC TGATCGACAC GCTGATCCCG GCGCTGGCCG CGTTCAAGGC CGCTCAGGCC
GGCGGCGCCG ACTTCAGTGC CGCGTTGTCC GCGATGAGCG CCGCGGCCGA AGCCGGCAAG
GATTCGACGA AGGCGCTGCA GGCGCGCATC GGCCGCTCGG CCCGGCTGGG GCCGCGTTCG
ATCGGCGTGC TCGATGCCGG CGCCACCTCG TGCTGCCTGA TCCTGCAGAC GCTGGCGCGC
TCGCTGCAGC AGCGCCTCGC GGCCTGA
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| Protein sequence | MAMNRVINNP DLVVEDMLTG WLAAHAATVC ATAENPRVVK RVQSPEAGKV GVVTGGGSGH
EPAFLGYVGD GMVDAVAIGE IFSSPTAKSF LDAMRAADGG AGVACLYGNY AGDNMNVKMA
IQMAEREGIV VRTVVANDDV PSAPKGDEAK RRGVAGEIVM WKVGAAKAAM GGSLDEVIAA
AQKAIDHTRS IGIGLSACVI PAVGHANFTI EHGTMEVGIG HHGEPGIDVR ATASAAEMAE
MMLNVVLPDL PFGAGDRVAV LVSGLGATPL MEQYILYGEI RKRLAAQGIT VAFNQVGNLF
TSLEMMGVTL TLMKLDDELE ACLAHPCSCV GLTVAGDASQ ASAGRAYSGS ATAKSTGPVA
ARAAAVARTA VGPALALNGA GGLVRDLIDT IVANRQYLSD IDGLIGDGDH GINMAKGFTG
CGTRLDALGD AAQSLPAALE QLSKALMDDI GGSMGPLYGN FFLGFVNTLE PHAMLDAALF
GDALAAAVAN VQAMGNAQVG DKTLIDTLIP ALAAFKAAQA GGADFSAALS AMSAAAEAGK
DSTKALQARI GRSARLGPRS IGVLDAGATS CCLILQTLAR SLQQRLAA
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