| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0392 |
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| Symbol | |
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| ID | 6160575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 432596 |
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| End bp | 433588 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663141 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001789432 |
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| Protein GI | 171057083 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0318668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACC TGGCGCGGCT GGCGGGGGTT TCGGTGGCCA CCGTCTCGCG CGCGCTCAAC
GGCAGCCCCG AGGTCAGCCT GGCGACGCGC CAGCGCATCG GCGAACTGGC CCGCTCGCTG
AACTACACCG TCAACATCGG CGCCAAGAAC CTGCGCACCA AGCAGAACCG CACCGTCGCG
GTGGTGATCC CGTACGACGA GCAGAGCCGT CAGCACATCA CCGATCCGTT TTTCCTGGCC
ATGCTCGGCA GCCTGGCCGA TGCGCTGACC GACCGCGGCT TCGACCTGCT GCTGTCGCGG
GTCGACTCCG GCTACCTGGC CGCCGCCAGC CAGCTGTACG AATCGGGCGC GGTGATCGGC
ACCGTGCTGA TCGGCCAGTG GCGCCACCAC GCCCAGCTCA ACGCGCTGGC GCAGCGCGGT
GCGCCGCTGG TGGTGTGGGG CGCGCAGCTG CCGCAGCAGG TCTATTGCAG CGTCGGCGGC
GACAACCTCG CCGGCGGCCA GCTGGCCACC CGCCACCTGA TCGAACGCGG CGGCCGGCGC
ATCGTCTTCA TGGGCGACCC GTCCCTGCCC GAGGTCGCGC AGCGGCTGGC CGGCTACCAC
CAGGCGCTGG CCGAGGCCGG CATCGCACCC GACCCGGCGC TGCAGCTGAA CGTGCCGTTC
GAGACCGGCC AGGCGCGCGC CGCGCTCACC CGCCTGATCG AGAGCGGCAT CGCGTTCGAC
GCCATCTTCG CCTGCAGCGA CGTGCTCGCC ATCAGCAGCA TGCAACTGCT GCGGCTGTAC
GGGCGCGCGG TGCCGCAGCA GGTGCTGGTG GTCGGCTACG ACGACATCGA GTGGGCCAGC
CACGCCGACC CGCCGCTGAC CACCGTGCGC CAGCCGATCG CCGCCGCCGG CATCGAGATC
GTGCAGGCGC TGTTCGACGG TGTCGCCGGC CAGCCGACGC CCCCGCGCAC GCTGCCGGTC
GAGCTGGTGG TGCGGCAAAG CTCCTTGCGC TGA
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| Protein sequence | MADLARLAGV SVATVSRALN GSPEVSLATR QRIGELARSL NYTVNIGAKN LRTKQNRTVA
VVIPYDEQSR QHITDPFFLA MLGSLADALT DRGFDLLLSR VDSGYLAAAS QLYESGAVIG
TVLIGQWRHH AQLNALAQRG APLVVWGAQL PQQVYCSVGG DNLAGGQLAT RHLIERGGRR
IVFMGDPSLP EVAQRLAGYH QALAEAGIAP DPALQLNVPF ETGQARAALT RLIESGIAFD
AIFACSDVLA ISSMQLLRLY GRAVPQQVLV VGYDDIEWAS HADPPLTTVR QPIAAAGIEI
VQALFDGVAG QPTPPRTLPV ELVVRQSSLR
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