Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0372 |
Symbol | |
ID | 6163778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 406581 |
End bp | 407465 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641663121 |
Product | phage SPO1 DNA polymerase-related protein |
Protein accession | YP_001789412 |
Protein GI | 171057063 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000046016 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGTGGA CTGAACGCCA GCGGGCGATG CTCGGCGAGA TCGGCATCCG GCTGTGGCCG TCGCCGCAGG CCGGGGCCGC TGAAACGCCG GCCGCGCCGC CGGCTGCCGT GCCGGTGGTG CCCGTCGCCC GATCGCTGGC CCAGCCGGCG CCGGGCTTGG CCGTGCCCAC GGCGGCCAAC CCTGCGCCGA GTGCGACCGC ACCGCCGCCA TCCGTTGTCC GTCCGCGAGT CGACCCCGCA CCGGCCGCAC CGGCCGCACC GCTGGCCCGG CCCGGCGGCC TGATCCAGGC TGCGCCGGCC GGCGCGGTGT CGGCGCTGGA CTGGCCCGAG CTGCAGGCGG TGGTCGAGGC CTGCCGGGCC TGCGGCTTGT GCGAGAGCCG GCGCCAGACC GTGTTCGGCG TCGGCCATCA CCAGGCGCAC TGGATGCTGG TCGGCGAGGC GCCGGGCGAG CAGGAGGATC TGCAGGGCGA GCCCTTTGTC GGCAAGGCCG GCCAGCTGCT CGACAACATG CTGCGTGCGG TCGGCCTGAC CCGCGAGCAG GCCGAGCCGG CGCGGCAGGT CTACATCGCC AACGTCCTGA AGTGCCGTCC GCCCGGTAAC CGCAACCCCG ATCCGCAGGA GGTGCAGCGC TGCGAGCCTT TCCTGCAACG CCAGGTCGAG CTGGTGCGCC CGCGCCTGAT CCTGGCGATG GGGCGGTTCG CGGTGCAGTC GCTGCTCAAG ACCTCGGAGC CGATCGGCCG CCTGCGTGGC AAGTCGCATC ACTACCACGG CGTGCCGGTG GTGGTGACCT ATCACCCGGC CTATCTGCTG CGCAACCCGC TCGACAAGGC GCGCGCCTGG GAAGACCTCT GCCTGGCGCG TGAGCTGATC CAGGCCGCGG CCTAG
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Protein sequence | MPWTERQRAM LGEIGIRLWP SPQAGAAETP AAPPAAVPVV PVARSLAQPA PGLAVPTAAN PAPSATAPPP SVVRPRVDPA PAAPAAPLAR PGGLIQAAPA GAVSALDWPE LQAVVEACRA CGLCESRRQT VFGVGHHQAH WMLVGEAPGE QEDLQGEPFV GKAGQLLDNM LRAVGLTREQ AEPARQVYIA NVLKCRPPGN RNPDPQEVQR CEPFLQRQVE LVRPRLILAM GRFAVQSLLK TSEPIGRLRG KSHHYHGVPV VVTYHPAYLL RNPLDKARAW EDLCLARELI QAAA
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