| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0339 |
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| Symbol | |
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| ID | 6161140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 367875 |
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| End bp | 369938 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663088 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001789379 |
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| Protein GI | 171057030 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAG CCCCGTCGAC CCTCAACCCC GCCCAGCTGG AGGCGGTCAA CCACCTGCAC
AGCCCTTGCC TGGTGCTGGC CGGCGCGGGT TCGGGCAAGA CGCGCGTGAT CACGCACAAG
ATCGCGCGGC TGCTGCAGGC CGGGCTCAAG CCCGACCAGA TCGCCGCCAT CACCTTCACC
AACAAGGCGG CGCAGGAAAT GCGCGAACGC GCCAGGTCGC TGATCGGCGC GCGCGCGGCC
AAGCACCTGG TGATCGCGAC CTTCCACAGC CTGGGCGTGC GCATGCTGCG CGAGGACGGC
GAGTGCATGG GCCTGAAGCC GAAGTTCTCG ATCCTCGACG CCGACGACGT GCTCGGCGTG
CTGCGCGACG CCGGCGGCAC CACCGACCCG AAGGTGGCGC GGCGCTGGCA GTGGACCATC
AGCCTGTGGA AGAACCAGGG CCTGAACTGG GAGCAGGCCG AAGCCGCCGC CGCCGATGCC
GACGAGCAGG TGGCCGCGCG CGTGATGAAG CTCTATCACG AGCGCCTGGC GGCCTATCAG
GCGGTCGATT TCGACGACCT GATCGGCCTG CCGCTCAAGC TGCTGCAGAC CAACGAGGCG
GCGCGCCTGA AGTGGCGCCG CCAGCTGCGC CACGTGCTGG TCGACGAATA CCAGGACACC
AACGCCACGC AGTACGACGT GCTGAAAGAG ATCGTCGGCC CCGACGGCGT GTTCACCGCC
GTGGGCGACG ACGACCAGAG CATCTACGGC TGGCGCGGCG CCACGATCGA GAACCTCAAG
CGCCTGCCGC AGGACTACCC CACGCTCAAG GTCATCCCGC TGGAGCAGAA CTACCGCTCG
ACGGCGGCGA TCCTGAACGC GGCCAACAAC GTCATCGCGC TGAACCCGAA GATCTTCCAG
AAGAAGCTCT GGAGCGACCT GGGCGAGGGC GAGCCGGTGC GGCTGGTCGA GTGCGACCAG
GAAGAGCACG AGGCCGAACG TGCGGTGGCG CGCATCCAGG GCATCCGCGC CAATGCCACC
GGCGCCTACA CCGGCACGAC CGACTGGAAG GATTTCGCGA TCCTGTATCG CGCCAACCAC
CTCAGCCGCA AGCTCGAGGA GGCGCTGCGC AAGGCCCAGA TCCCGTACAA GGTGTCGGGC
GGGCAGAGCT ATTTCGATCG CGCCGAGATC AAGGACCTGT GCGCCTGGCT GCGCCTGCTG
GTCAACCAGG ACGACGATCC GGCGTTCCTG CGCGCGGTGA CCACGCCCAA GCGCGGCATC
GGCCACACCA CGCTGGGCGC TTTGGGCGAG TTCGCCGGCA AGTGGAAGGT CAGCCTGTTC
GAGGCGCTGT TCAAGGAGTC GCTCGCCGCC GCCTTGAGCG CCAAGGCGAT CGGCTCGCTG
CACGAGTTCG GCCGCTACGT GAACGACCTG GAGCACCGCG CCCGCCACAC GGTGGGCGCC
GAGGAAGCCA AGCCGATGCT GATGGAGTGG CTCAAGGACA TCGGCTACGA GCAGTTCCTC
TACGACGGCG AAGAAAACGA GAAGGTCGCC GCGGCGCGCT GGAACAACGT GGTCGACTTC
GTCGACTGGA TCGCCAAGCG CTGCGGTGGC CAGGTCGAGG CCGACGGCAG CGCGCAGGTC
GAGATCGAGC GCAAGAGCGT GCTCGATGTC GCGCAGACCA TCAGCGTCAT CCTGAGCCTG
GCCGAGCGCG GCGACGAGCA GGACATGGTG ACGCTGTCGA CGCTGCACGC CAGCAAGGGC
CTGGAGTGGC CGCACGTGGT GCTGGTGAGC ATCAACGAGG GCACGCTGCC GTTCCAGCGC
GATGAAGAAG AGATGACGGC CGAGCGCCTC GAAGAAGAGC GCCGGCTGAT GTACGTGGGC
ATCACGCGCG CCCGCAACAC GCTGCTGGTG AGCACGCTGC TGCGGCAGAA ACGCGGTCGC
GAGGTCCGCA AGGCACTGCC GAGCCGCTTC ATCGCCGAGA TGAAGCTCGA CGAGCGCACG
GTGAAAGAAG ACCCGCGCGA GAAGCTCAAG GCGCTGCGCG CCGAGTTCGC GGCCCGCGCC
GCGGCGGCCA AGCCGGCCGT CTGA
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| Protein sequence | MAEAPSTLNP AQLEAVNHLH SPCLVLAGAG SGKTRVITHK IARLLQAGLK PDQIAAITFT
NKAAQEMRER ARSLIGARAA KHLVIATFHS LGVRMLREDG ECMGLKPKFS ILDADDVLGV
LRDAGGTTDP KVARRWQWTI SLWKNQGLNW EQAEAAAADA DEQVAARVMK LYHERLAAYQ
AVDFDDLIGL PLKLLQTNEA ARLKWRRQLR HVLVDEYQDT NATQYDVLKE IVGPDGVFTA
VGDDDQSIYG WRGATIENLK RLPQDYPTLK VIPLEQNYRS TAAILNAANN VIALNPKIFQ
KKLWSDLGEG EPVRLVECDQ EEHEAERAVA RIQGIRANAT GAYTGTTDWK DFAILYRANH
LSRKLEEALR KAQIPYKVSG GQSYFDRAEI KDLCAWLRLL VNQDDDPAFL RAVTTPKRGI
GHTTLGALGE FAGKWKVSLF EALFKESLAA ALSAKAIGSL HEFGRYVNDL EHRARHTVGA
EEAKPMLMEW LKDIGYEQFL YDGEENEKVA AARWNNVVDF VDWIAKRCGG QVEADGSAQV
EIERKSVLDV AQTISVILSL AERGDEQDMV TLSTLHASKG LEWPHVVLVS INEGTLPFQR
DEEEMTAERL EEERRLMYVG ITRARNTLLV STLLRQKRGR EVRKALPSRF IAEMKLDERT
VKEDPREKLK ALRAEFAARA AAAKPAV
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