Gene Lcho_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0338 
Symbol 
ID6160569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp367212 
End bp367790 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content71% 
IMG OID641663087 
ProductNnrU family protein 
Protein accessionYP_001789378 
Protein GI171057029 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGT TGATCCTGGG ACTGGTGCTG TTTCTCGGCG TGCACTCGGT GCGCATCGTG 
GCCGACGACT GGCGCACCCG CCAGATCGCG CAGCGTGGCG AAGGTGTCTG GAAGGGTGTG
TATGCGCTGC TGTCGCTGAT CGGCTTCGTG CTGATCGTCC AGGGCTACGG CCAGGCGCGG
CTGGCGCCGG TGGTGCTGTG GACGCCGTGG GTCGGCGGGC GTCATCTGGC GAGCCTGCTG
ACGCTGATCG CCTTCGTGTT GCTGGCCGCG GCCTATGTGC CCGGCAACGC GATCAAGGCG
AAGCTCAAGC ACCCGATGGT GCTGGGCGTG AAGGTCTGGG CGCTGGCGCA CCTGCTGGCC
AACCACACGC TGGCCGATGC GCTGCTGTTC GGCGCCTTCC TGGTCTGGGC GGTGCTGGAT
TTCCGCAGCG CGCGCCGGCG TGCTGCGCCT GCGGTCGCGC CGGTGTCGGC CGCGCGCACC
GGCCTGACGG TGGTCGCGGG GCTGGTCGCG TGGGCCGCCT TCGCGTTCTG GGCGCACGGC
GCCTGGATCG GCGTGCGGCC GTTCGGCGGC GCGGGCTGA
 
Protein sequence
MSMLILGLVL FLGVHSVRIV ADDWRTRQIA QRGEGVWKGV YALLSLIGFV LIVQGYGQAR 
LAPVVLWTPW VGGRHLASLL TLIAFVLLAA AYVPGNAIKA KLKHPMVLGV KVWALAHLLA
NHTLADALLF GAFLVWAVLD FRSARRRAAP AVAPVSAART GLTVVAGLVA WAAFAFWAHG
AWIGVRPFGG AG