Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0338 |
Symbol | |
ID | 6160569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 367212 |
End bp | 367790 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641663087 |
Product | NnrU family protein |
Protein accession | YP_001789378 |
Protein GI | 171057029 |
COG category | [S] Function unknown |
COG ID | [COG4094] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATGT TGATCCTGGG ACTGGTGCTG TTTCTCGGCG TGCACTCGGT GCGCATCGTG GCCGACGACT GGCGCACCCG CCAGATCGCG CAGCGTGGCG AAGGTGTCTG GAAGGGTGTG TATGCGCTGC TGTCGCTGAT CGGCTTCGTG CTGATCGTCC AGGGCTACGG CCAGGCGCGG CTGGCGCCGG TGGTGCTGTG GACGCCGTGG GTCGGCGGGC GTCATCTGGC GAGCCTGCTG ACGCTGATCG CCTTCGTGTT GCTGGCCGCG GCCTATGTGC CCGGCAACGC GATCAAGGCG AAGCTCAAGC ACCCGATGGT GCTGGGCGTG AAGGTCTGGG CGCTGGCGCA CCTGCTGGCC AACCACACGC TGGCCGATGC GCTGCTGTTC GGCGCCTTCC TGGTCTGGGC GGTGCTGGAT TTCCGCAGCG CGCGCCGGCG TGCTGCGCCT GCGGTCGCGC CGGTGTCGGC CGCGCGCACC GGCCTGACGG TGGTCGCGGG GCTGGTCGCG TGGGCCGCCT TCGCGTTCTG GGCGCACGGC GCCTGGATCG GCGTGCGGCC GTTCGGCGGC GCGGGCTGA
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Protein sequence | MSMLILGLVL FLGVHSVRIV ADDWRTRQIA QRGEGVWKGV YALLSLIGFV LIVQGYGQAR LAPVVLWTPW VGGRHLASLL TLIAFVLLAA AYVPGNAIKA KLKHPMVLGV KVWALAHLLA NHTLADALLF GAFLVWAVLD FRSARRRAAP AVAPVSAART GLTVVAGLVA WAAFAFWAHG AWIGVRPFGG AG
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