Gene Lcho_0295 details

Gene Information

• Locus tag: Lcho_0295
• ID: 6161825
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 312195
• End bp: 312881
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 641663039
• Product: acetyltransferase
• Protein accession: YP_001789335
• Protein GI: 171056986
• COG category: [R] General function prediction only
• COG ID: [COG0110] Acetyltransferase (isoleucine patch superfamily)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 74
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTCATGA TTCGGGCACA TCTGAATCGC TGGCGCCGCC GGCTGCTGCA TGCGCTGCAG 
TTCCGCACCG TCTTCGGCGA GCGCTCGCAG GGCCGCTGGC TGCCCAACAC GCGCATCTCG 
CCGTCGACCT GCATCGAGTT CGAGGATCGG CTGACGCTGG GCGACCACGT CTACATCGGC 
CACTTCAACC TGATCGAGGC CAGCGGCGGG GTGGTGATCG AGGAGGGCGT GCAGATCACC 
AACCACGTCA GCATCGTCAC CCACAGCTCG CACCGCAGCC AGCGCCTGCT CGGCCAGGCG 
TTCGTCACCT GGCCCAAGGG CGTACCACCG CCGATGGCGC CCGAGGCGCC GCCCGAGCTC 
GACTGGATCT CCGGCAAGCC GATCGAACGC CAACGCGCCG CGCCGAAGCA GCCTCCGGGC 
TGGGTGGCCG GGCCGGTGCA CATCGGCGCC TACAGCTTCA TCGGCCCGCA CAGCCTGATC 
GAGGCCAACA GCCGGCTCGG CCGCGGCTGC ATCGTCTGCG CGGGCAGCCA GGTGCGCGGC 
GAGTTCACCG AGTTCTCGAT CCTCGAAGGC GCACCGGCGC GCGTGATCGG CGATGCCCGC 
CGTGCCGACC AGCGGCTGCT GAGGCAGCAC CCTGAACTGC ACGATCTGTA CGCCGCCTGG 
GCCGGCGAGC CGGGCCGCGC GCGTTGA 

 

Protein sequence

MVMIRAHLNR WRRRLLHALQ FRTVFGERSQ GRWLPNTRIS PSTCIEFEDR LTLGDHVYIG 
HFNLIEASGG VVIEEGVQIT NHVSIVTHSS HRSQRLLGQA FVTWPKGVPP PMAPEAPPEL 
DWISGKPIER QRAAPKQPPG WVAGPVHIGA YSFIGPHSLI EANSRLGRGC IVCAGSQVRG 
EFTEFSILEG APARVIGDAR RADQRLLRQH PELHDLYAAW AGEPGRAR